Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 5e-11 >seq5 Length=1948569 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || ||||| || || || || || | ||||| ||||| || ||||| || || |||| Sbjct 563070 ACGGTACCCGCCTACTTCAACGATGCCCAACGGCAAGCAACAAAAGACGCCGGTACTATT 563011 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || | || || ||| | ||||| ||||||||||||||||| | |||||||| Sbjct 563010 GCTGGCCTCGACGTGCTCCGTGTCATCAACGAACCTACTGCTGCTGCGTTGGCATATGGC 562951 Query 550529 CTTGA 550533 || || Sbjct 562950 CTCGA 562946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295312501370