Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 181 2e-40 >seq6 Length=3889359 Score = 181 bits (200), Expect = 2e-40 Identities = 444/661 (67%), Gaps = 34/661 (5%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| ||||||||||| | || ||| || |||||||| ||||||||| || || Sbjct 954258 ATATGGCAGATGTACAAGGACGCCCAAGCATCCTTCTGGACCGTCGAAGAGATCGACCTC 954317 Query 25537 GCCAAGGA---CATGGAC--GGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || | || ||||||| | | | |||| || | |||||||||| || || Sbjct 954318 TCCTACGACCTCATGGACTGGACGACCAAGCTCACCCCCA--ACGAGCAGCACTTCGTCT 954375 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||||| | || ||||| || ||||| || || || || |||||||| || |||| Sbjct 954376 CCTACGTCCTCGCCTTCTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCGTCGAGC 954435 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| ||| ||||||||| || ||||| || |||||||| |||||||| | Sbjct 954436 GGTTCTCCAACGAAGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 954495 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACG 25768 |||| || |||||||| ||| ||| | ||| || || |||||| | ||| Sbjct 954496 TCGAGAACGTGCACTCGGAGACGTA---CTCGCTCCTCATCGACACGTACGTCCGCGACC 954552 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 ||| || | | ||||| | || ||| | ||| ||| || || | | |||| Sbjct 954553 CCGCGCAGCGCGCGTTCCTGTTCGACGCGATCAACACCATCCCCTGCGTCGCGCGCAAGG 954612 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGA---GCGCTACGT-TTGGC-GAGCGGCT 25883 | |||||| || |||||| ||| || ||||| ||| || || ||||| || Sbjct 954613 CCGACTGGGCCCTGCGCTGGATC----GCC-GACTCGCGCTCCGTCTTCGCAGAGCGCCT 954667 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 || || || || || || |||||| |||| ||| ||| || || || || |||||||| Sbjct 954668 CGTCGCGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGGTCCTTCGCCGCGATCTTCTG 954727 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||||| || || ||||| || || || ||||||||||||||| | | || Sbjct 954728 GCTCAAGAAGCGCGGCTTGATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCCCGCGA 954787 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAAC- 26062 ||||| | |||| || ||||| |||||||| | | |||| ||| || | Sbjct 954788 TGAGGGCATGCACACCGACTTTGCGTGCCTGCTGTTC---CACCACCTGCGCCGGCGGCC 954844 Query 26063 -CTTCTCAAGAGACCGTCTAC--AGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT 26119 | || || | ||| | | | |||||| ||||||||||||||||||||||||| Sbjct 954845 GCATCCCAGG----CGTGTGCTGAAAATCATCTCCGAGGCTGTGGAGATCGAGAAGGAGT 954900 Query 26120 T 26120 | Sbjct 954901 T 954901 Score = 176 bits (194), Expect = 8e-39 Identities = 386/573 (67%), Gaps = 13/573 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || ||||||||| || || || || ||| Sbjct 952792 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCTGAGGAAATGGACCTG 952733 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || | | |||| | ||| || ||| || || | || || || Sbjct 952732 TCCAAGGATCTGCATGACTGGAACAACCGC-CTCAACAACGATGAACGCCACTTCATCTC 952674 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | |||| |||| ||||| || ||||| || ||||| || |||||||| ||| ||| | Sbjct 952673 GCACGTTCTGGCGTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTGGTAGAGCG 952614 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| ||| || || ||| | ||||| || |||||||| |||||||| || Sbjct 952613 TTTCTCCAACGAGGTCCAGGCGGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 952554 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGT 25769 || || | ||||||||| ||| | ||| || || ||||| || | ||| Sbjct 952553 GGAGAACATTCACTCTGAGACGTA---CTCGCTCCTCATCGACACGTATATCAAGGACCC 952497 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 ||| || | || | || || | |||||||||| || ||| |||| |||| |||||| Sbjct 952496 CGCACAGCGCGAGCACCTCTTCGATGCCATCGAGACTATCCCCTGCATTAAGAAGAAGGC 952437 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAG 25888 ||||| | |||||| | | || | | | | || | || || || |||| Sbjct 952436 TGATTGGGCTCTTCGCTGGATC-TCGGACAAGGAGTCAGCCTTCGCTGAACGCCTTGTAG 952378 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 |||| ||||| || ||||| ||||||||| || || || || ||||||||||||||| Sbjct 952377 CCTTCGCTGCCGTCGAGGGTATCTTTTTCTCTGGCTCTTTCGCCTCCATCTTCTGGCTCA 952318 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||| || || ||| || |||||||||||| | | || |||| Sbjct 952317 AGAAGCGCGGCTTGATGCCTGGCCTCACCTTCTCTAACGAGCTCATCTCCCGCGATGAGG 952258 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 | | |||| || || |||||| |||||| || Sbjct 952257 GCATGCACACCGACTTCGCCTGCTTGCTCTTCA 952225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844649062720