Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq7 262 5e-65 seq1 208 1e-48 seq9 187 3e-42 seq3 143 4e-29 seq12 102 1e-16 >seq7 Length=3674663 Score = 262 bits (290), Expect = 5e-65 Identities = 551/816 (68%), Gaps = 4/816 (0%) Strand=Plus/Plus Query 196052 AATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCT 196111 || ||| | ||||| ||||| || | || || || || |||||||| || || ||||| Sbjct 2539997 AACCCTCGTGCTCTGCGTCGTCTGCGTACGGCTTGCGAGCGTGCCAAGCGTACGCTCTCC 2540056 Query 196112 TCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA 196171 || | || || || | | || || ||||| | || || || ||||||||||| || Sbjct 2540057 TCCGCCGCCCAGACCACCATCGAAATCGATTCCCTCTTCGAGGGCATTGACTTCTACACC 2540116 Query 196172 ACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAA 196231 | | || ||||| ||||| || || | | || | || | | | || Sbjct 2540117 TCGCTCACGCGTGCGCGTTTCGAGGAACTCTGCCAAGACCTCTTCCGCAGCACCCTTGAG 2540176 Query 196232 CCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTC 196291 || || || | || ||||||||||| ||||| || ||| | |||| | || || ||| Sbjct 2540177 CCCGTCGAGAAGGTCCTTCGTGACGCGAAGATCGACAAGGCCCAGGTGCACGAGATCGTC 2540236 Query 196292 CTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACA-GATGCTTTCTAGCTTCTTCAA 196350 || || || || || || ||||| || | || || | | | || ||||||||| Sbjct 2540237 CTCGTTGGCGGTTCCACTCGTATCCCCC-GTGTCGTCAAGCTCGTGTCCGACTTCTTCAA 2540295 Query 196351 TAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGT 196410 || || ||||| |||||||||| || || || ||||| || ||||| ||||| Sbjct 2540296 CGGCAAGGAGCCCAACAAGTCGATCAACCCCGACGAGGCCGTTGCGTACGGTGCTGCCGT 2540355 Query 196411 TCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGA 196470 ||||||||||| ||| | || | | | || ||| || || || || ||||| Sbjct 2540356 CCAGGCTGCTATCCTCACGGGCGACACCTCGGAGAAGACCCAGGACCTCCTTCTGCTTGA 2540415 Query 196471 TGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGA 196530 |||||| ||| | || || ||| |||| || ||||||||||| ||||| | || | Sbjct 2540416 TGTTGCCCCCTTGTCGCTCGGTATTGAGACGGCGGGTGGTGTCATGACGCCTCTCATCAA 2540475 Query 196531 TAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA 196590 | ||||| || | || || |||||| | |||| || ||||| ||||| || || Sbjct 2540476 GCGTAACACTACGGTCCCCACGAAGAAGTCTGAGATCTTCTCCACGTACTCCGACAACCA 2540535 Query 196591 ACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCT 196650 || ||||| | || || || || || || || || |||| | ||||| ||| | || Sbjct 2540536 GCCCGGTGTGCTCATCCAGGTCTACGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCT 2540595 Query 196651 ACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || || | ||||| | | || || || |||||||| | |||||||| ||||| | Sbjct 2540596 CCTCGGCAAGTTCGAGCTTTCCGGCATCCCCCCTGCACCCCGCGGTGTTCCCCAGATCGA 2540655 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770 || |||||| || ||||| ||||| ||||| |||||| | || |||||| | | Sbjct 2540656 GGTCACCTTCGACATTGACGCGAATGGTATTCTTAACGTCTCCGCGTCAGACAAGACGAC 2540715 Query 196771 TGGCAAATCTGAAAAG-ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAA 196829 ||||| || ||| | || ||| ||||| |||||||| || || || |||||||| | Sbjct 2540716 CGGCAAGTC-GAACCGCATCACGATCACCAACGACAAGGGCCGTCTGTCGAAGGAGGAGA 2540774 Query 196830 TTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGG 196865 | || || |||||| || || || ||||||| || Sbjct 2540775 TCGAGCGCATGGTTTCCGAGGCCGAGAAGTACAAGG 2540810 Score = 168 bits (186), Expect = 9e-37 Identities = 251/356 (71%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || || || || || || ||||| | | ||||||||||||| || ||||| | | | Sbjct 2539523 CCTGAGGAGATCTCCTCCATGGTCCTCACGAAGATGAAGGAGATCGCCGAATCGTACCTC 2539582 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||| || || | || ||||| || || || || ||||||| || || || || Sbjct 2539583 GGTGGTACCGTCACGTCCGCCGTTGTCACCGTGCCGGCCTACTTCAACGACTCCCAGCGT 2539642 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 || || || |||||||| | | | || | || || ||| ||| | || ||||| || Sbjct 2539643 CAAGCAACCAAGGACGCAGGTACCATCTCCGGCCTCAACGTCCTTCGTATCATCAACGAG 2539702 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || |||||||| || |||||||| || |||||||| | | | || || || Sbjct 2539703 CCCACGGCGGCTGCCATCGCTTATGGCCTCGACAAGAAGACCCAGGGCGAGCGCAACGTC 2539762 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| ||||| || || || || || ||||| || || |||| || || | ||| Sbjct 2539763 CTCATCTTCGATCTTGGCGGAGGAACCTTCGATGTGTCTCTCCTCACCATCGAGGAGGGT 2539822 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||||||||||||||| ||||| || |||||||| || ||||| Sbjct 2539823 ATCTTCGAGGTCAAGGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGACTTCGA 2539878 Score = 140 bits (154), Expect = 4e-28 Identities = 193/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| ||||| ||||| | ||||| ||||| |||| ||| || || Sbjct 1556002 GTGCCCGCCTACTTCAACGATTCTCAACGTCTCGCGACCAAGGATGCTGGTGCCATCGCT 1555943 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | ||| | || ||||| || || || || || || ||||| || ||||| Sbjct 1555942 GGTCTCGAGGTTCTCCGTATCATCAACGAGCCCACCGCTGCCGCTATTGCCTACGGTCTT 1555883 Query 195842 GACAAGAA--CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 ||| | |||| | ||| | || || | ||||| ||||||||||| ||||| | Sbjct 1555882 GACCGCCAGTCAAGTGCTGAGA--AGAACGTCCTCATCTTCGATCTCGGTGGAGGTACTT 1555825 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| || ||||| || |||||| | || | || ||||| |||||||||| Sbjct 1555824 TCGATGTCTCCCTCCTCAACATCACTGGTGGTGTCTTTGCCGTCAAGGCGACTGCTGGTG 1555765 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || | |||||||| |||||||| Sbjct 1555764 ACACCCACTTGGGTGGTGAGGATTTCGA 1555737 Score = 136 bits (150), Expect = 5e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || ||||| ||||| ||||||||||| ||||| ||| | || ||||| || ||||| Sbjct 2539168 TGCGTCGGTGTCTGGCAGAATGATCGTGTTGAGATCATCGCCAACGACCAGGGTAACCGC 2539227 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || || || || |||||||| || || || | || || | | || ||||| || || Sbjct 2539228 ACGACGCCCTCCTACGTTGCTTTCACCGACACCGAGCGGTTGATCGGCGATGCGGCCAAG 2539287 Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511 || ||| || |||||||| ||| || ||||| || ||||||||||| || |||||| Sbjct 2539288 AACCAGGTCGCGATGAACCCCCACAACACCGTCTTCGATGCGAAGCGTCTCATCGGTCGC 2539347 Query 195512 AAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACT 195551 ||||| | || |||| |||| |||||| ||| ||| Sbjct 2539348 AAGTTCACCGACGCTGAAGTTCAAGCCGATATCAAGCACT 2539387 >seq1 Length=4437623 Score = 208 bits (230), Expect = 1e-48 Identities = 183/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||||| || || || || |||||||||||||||||||| || Sbjct 1911108 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTTGAGTCTTCG 1911167 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||||||| |||| || ||||| ||||| ||||| || || || || || ||| Sbjct 1911168 GACACCATCGATAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATCCCGCCGGACCAG 1911227 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || || || || |||||||| ||||| ||||| || | ||||||||| Sbjct 1911228 CAACGCCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCCGATTACAAC 1911287 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||||||||| ||||||||||| | || || || ||| Sbjct 1911288 ATCCAGAAGGAGTCTACTCTTCACCTTGTTCTGCGTCTCCGCGGCGGT 1911335 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || |||||||| || || || ||||| ||| Sbjct 1911616 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACTATCACTCTGGAAGTCGAGTCCTCA 1911675 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| || ||||| || |||||||||||||| || ||||| ||| Sbjct 1911676 GACACGATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCGCCCGACCAG 1911735 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | || ||||| || ||||||||||| || || || || || | || |||||| Sbjct 1911736 CAACGGTTGATCTTTGCGGGAAAACAGCTTGAGGACGGTCGCACTCTGTCCGACTACAAC 1911795 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||| | ||||| | || || |||||| Sbjct 1911796 ATCCAGAAGGAGTCAACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGT 1911843 Score = 159 bits (176), Expect = 5e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || || || | || ||||| || ||||| |||||||||||||| | Sbjct 1911334 GTATGCAAATCTTCGTCAAGACATTGACCGGAAAGACGATCACGCTCGAGGTTGAGTCCT 1911393 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| || || || |||| || ||||| ||||| ||||| || || || || || | Sbjct 1911394 CTGACACTATTGACAATGTCAAGGCGAAGATCCAAGACAAGGAGGGTATCCCGCCGGACC 1911453 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || || || |||||||| || ||||||||||| || || || | | || |||| Sbjct 1911454 AACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGACGGTCGGACGTTGTCGGACTACA 1911513 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTC 172072 || |||| ||||| ||||| || || |||| || Sbjct 1911514 ACATTCAGAAGGAATCTACCCTGCATCTTGGTC 1911546 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || |||||||| || || || |||||||| ||||| ||||| || Sbjct 3825163 ATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACCATCACCCTTGAGGTGGAGTCTTCC 3825104 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || |||| ||||||||||| || ||||| || Sbjct 3825103 GACACTATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGG 3825060 >seq9 Length=3088601 Score = 187 bits (206), Expect = 3e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||||| || || || || |||||||| |||||||||||||| Sbjct 2856249 ATGCAGATCTTTGTCAAGACCCTGACCGGGAAGACCATCACCCTGGAGGTTGAGTCGTCG 2856190 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || |||||||| || || ||||| || ||||| ||||| ||| Sbjct 2856189 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCGCCCGACCAG 2856130 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| || || || ||||| || ||||| || || ||| | ||||||||| Sbjct 2856129 CAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACGCTCTCGGATTACAAC 2856070 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||| || || |||||||| || | ||||| || ||| Sbjct 2856069 ATCCAGAAGGAGAGCACCCTGCACCTTGTGCTTCGTCTTCGTGGCGGT 2856022 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||||||||| ||| | || || || || ||||| |||||||| ||||| | Sbjct 2856760 GTATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCTT 2856701 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| || |||| ||||||||||| || ||||| |||||||| || |||| Sbjct 2856700 CCGACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATC 2856641 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || ||||| |||||||| || ||| | || || || || |||||| | || |||| Sbjct 2856640 AACAGCGTCTTATCTTTGCTGGCAAGCAGTTGGAGGACGGTCGCACCCTCTCCGACTACA 2856581 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTC 172072 || | || |||||| || || ||||||| || Sbjct 2856580 ACATCCAGAAGGAGAGCACCCTCCACCTTGGTC 2856548 >seq3 Length=2042872 Score = 143 bits (158), Expect = 4e-29 Identities = 248/358 (69%), Gaps = 3/358 (1%) Strand=Plus/Minus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 ||||||| || ||||| ||||||| ||| |||||||||||||| || || | | Sbjct 1198343 CTCCCGAGGAGATTTCCGCTATGGTCTTGGGCAAGATGAAGGAGACCGCTGAGGCATATC 1198284 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | || | || |||| ||||| ||||| || || ||||||| || | || | Sbjct 1198283 TCGGCCGCTCCGTTTCTCATGCGGTTGTCACTGTTCCCGCCTACTTCAACGACGCGCAGC 1198224 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 | |||||||| |||||||| | | || || || || | || | || || || | Sbjct 1198223 GTCAGGCGACCAAGGACGCGGGCACCATCGCTGGCCTCCAGGTCCTCCGTATCATTAACG 1198164 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATG 195869 | || || || ||||| ||||| || ||||| |||||||| | ||| | | | Sbjct 1198163 AGCCCACTGCTGCTGCCATTGCCTACGGTCTTGACAAGAAGGGTGGCGAGTCTCAGATC- 1198105 Query 195870 TATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTG 195929 || | ||| || || |||||||| || || |||||||| || ||| |||||| | | Sbjct 1198104 -ATCG-TCTACGACCTTGGTGGTGGAACCTTCGATGTCTCCCTCCTCTCTATTGATGACG 1198047 Query 195930 GTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || | ||||| || ||| ||||||||||| |||||||| |||||||| || ||||| Sbjct 1198046 GTGTCTTCGAGGTCTTGGCGACTGCTGGTGACACTCATCTCGGTGGTGAGGACTTCGA 1197989 >seq12 Length=2614590 Score = 102 bits (112), Expect = 1e-16 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 |||| ||||| || || || || ||||| || || || |||||||||||||||||||||| Sbjct 1420141 GTAGAATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTTGAGT 1420200 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 | || ||||| || || || |||| |||||||| ||||| ||||| || Sbjct 1420201 CCTCGGACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGG 1420249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862293097360