Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 168 8e-36 seq3 123 3e-22 seq8 91.5 2e-12 seq10 87.8 2e-11 seq1 86.0 8e-11 >seq6 Length=3889359 Score = 168 bits (186), Expect = 8e-36 Identities = 158/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||| ||||||||||| ||||||| |||||| |||||||||||||||| ||||||||| Sbjct 955170 CGCCATGGCGTACTCGGACACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGAT 955111 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 || ||||| | ||| || || | || |||||| || ||| ||||| | | Sbjct 955110 CATGTCCATAAAGTCGAATGGATTCGTCGCGCCGTAGTGTTTCTCGTTCCCGAGGGCGAC 955051 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||||| ||||||||||| || || |||||||| ||||||||| | ||||||||||| || Sbjct 955050 GAGCAGCCGGTCGGCGACGAATTCTATGTACTGACACATGAGGTCTGCGTTCATGCCAAT 954991 Query 868870 GAGCGCCACCGGCAGCGACTC 868890 ||| | |||||| |||| ||| Sbjct 954990 GAGAGACACCGGAAGCGCCTC 954970 Score = 143 bits (158), Expect = 3e-28 Identities = 187/257 (73%), Gaps = 9/257 (4%) Strand=Plus/Plus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269 |||| |||||| ||||| | |||||||||||||||||| ||||||| | |||| ||| Sbjct 952287 AAGGTGAGGCCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCA 952346 Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329 ||||||||||| ||||||||||| || ||| | | || || || || ||| | || Sbjct 952347 GAGAAAAAGATACCCTCGACGGCAGCGAAGGCTACAAGGCGTTCAGCGAAG--GCTGA-- 952402 Query 869330 CCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACC 869386 |||||||| |||||| | ||||| || ||||| ||| | | | || | Sbjct 952403 --CTCCTTGTCCGAGATCCAGCGAAGAGCCCAATCAGCCTTCTTCTTAATGCAGGGGATA 952460 Query 869387 GTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATC 869446 || |||||||| |||||||| || | || |||||||||| ||| |||||||| Sbjct 952461 GTCTCGATGGCATCGAAGAGGTGCTCGCGCTGTGCGGGGTCCTTGATATACGTGTCGATG 952520 Query 869447 AGGAGCGAATAGGTCTC 869463 |||||||| || ||||| Sbjct 952521 AGGAGCGAGTACGTCTC 952537 Score = 140 bits (154), Expect = 4e-27 Identities = 185/252 (73%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| |||||||| || ||||||||||||||| ||| | | |||| ||| | ||| Sbjct 952539 GAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGCCGCCTGG 952598 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||| || | ||||||||||| ||||| |||||| ||||||||| Sbjct 952599 ACCTCGTTGGAGAAACGCTCTACCAGGTTCTCGTTGACGATACCGTCGGAGGCGGCGAAG 952658 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || ||||| |||||| ||| |||||||| || |||| | ||| ||| ||||| Sbjct 952659 AACGCCAGAACGTGCGAGATGAAGTGGCGTTCATCGTTGTTGAGGCGGTTGTTCCAGT-C 952717 Query 869810 ACGGTG-TCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | | | || | ||||||| ||||| |||||||||| || ||||||||||| || Sbjct 952718 ATGCAGATCCTTGGACAGGTCCATTTCCTCAGCGGTCCAGAAGGATGCCTCGGCCTTCTT 952777 Query 869869 GTACATCTCCCA 869880 |||||| | ||| Sbjct 952778 GTACATTTGCCA 952789 Score = 131 bits (144), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||||| ||| || ||| ||| ||| || ||||||||||| |||| ||||||||| Sbjct 951887 CGCCTTGGAGTAGTCAGACACACGCTTCTCAAAGAAGTTGGTCTTCCCCTGGAGCGAGAT 951946 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 || ||||| | ||| ||||| | ||||||||||| || ||||| | | Sbjct 951947 CATGTCCATGAAGTCGAAGGGGTTCGTGACGTTGTAGTGCTTCTCATCGCCGAGGGCGAC 952006 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||| || ||||| ||||| |||||||||||||| | ||| ||| | ||||||||| || Sbjct 952007 GAGAAGACGGTCAGCGACGAACTCGATGTACTGACGCATCAGGTTCGAGTTCATGCCAAT 952066 Query 868870 GAGCGCCACCGGCAG 868884 |||||| ||||| || Sbjct 952067 GAGCGCGACCGGAAG 952081 Score = 120 bits (132), Expect = 4e-21 Identities = 180/255 (71%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| | ||||||||| ||||||||||||||| ||| | | |||| || | | Sbjct 954513 CCGAGTGCACGTTCTCGATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGCGGCCT 954454 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || || |||||| || | ||||||||| ||||| ||||| |||||||| Sbjct 954453 GCACTTCGTTGGAGAACCGCTCGACGAGGTTCTCGTTGACGATCCCGTCCGAGGCGGCGA 954394 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGT 869807 | || || ||||||| || ||||| |||||| | | ||||| | | ||||| Sbjct 954393 AGAAGGCGAGGACGTAGGAGACGAAGTGCTGCTCGTTGGGGGTGAGCTTGGTCGTCCAGT 954334 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | |||| | |||||| | ||| ||| ||||||||| || || | ||| | | Sbjct 954333 CCATGAGGTCGTAGGAGAGGTCGATCTCTTCGACGGTCCAGAAGGATGCTTGGGCGTCCT 954274 Query 869868 TGTACATCTCCCATA 869882 ||||||||| ||||| Sbjct 954273 TGTACATCTGCCATA 954259 Score = 107 bits (118), Expect = 2e-17 Identities = 195/285 (68%), Gaps = 3/285 (1%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || || ||||| ||| | |||||| || | ||| || ||||| | |||||||||| Sbjct 954793 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAACGTGAGACCAGGCATCAAGCCGCGCTTC 954734 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||| ||| ||| || ||||| |||| ||||||||||||||| || Sbjct 954733 TTGAGCCAGAAGATCGCGGCGAAGGACCCGGAGAAGAAGACGCCCTCGACGGCGGCGAAC 954674 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| ||||| || || | || || | | | |||||| || |||||| Sbjct 954673 GCGACGAGGCGCTCTGCGAA---GACGGAGCGCGAGTCGGCGATCCAGCGCAGGGCCCAG 954617 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | || | || | |||| ||| ||| || ||| | | Sbjct 954616 TCGGCCTTGCGCGCGACGCAGGGGATGGTGTTGATCGCGTCGAACAGGAACGCGCGCTGC 954557 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || ||||| ||| || |||||||| |||||||| || |||||| Sbjct 954556 GCGGGGTCGCGGACGTACGTGTCGATGAGGAGCGAGTACGTCTCC 954512 >seq3 Length=2042872 Score = 123 bits (136), Expect = 3e-22 Identities = 239/345 (69%), Gaps = 11/345 (3%) Strand=Plus/Minus Query 1726679 AAGGTATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCG 1726738 |||| || || | || ||||| ||||| |||||||| || | || ||| ||||| Sbjct 1027058 AAGGCGTGGGGGTTGGAGGCGGAGCGCATGGCGTCGACGGCGACGGACATGCTGCCGTCT 1026999 Query 1726739 GTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGG 1726798 |||||||||||||||||||||| | | | | || || | ||||||||| | |||| Sbjct 1026998 GTGCCGTTCTTGAAGCCGATGGGGAAGGAGACGCCGGAGGCGAGCTCGCGGTGGAGCTGG 1026939 Query 1726799 CTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA-AGGGGC 1726857 |||||| ||||| ||||| | ||||||||| | | ||||| || | || |||| Sbjct 1026938 GACTCGGTGGTGCGGGCGCCGATGGCGCCCCAGGAGATGAGGTCGGCGATGTACTGGGGG 1026879 Query 1726858 CACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGC- 1726916 | | | | ||| | |||| | | ||||| || || || | || ||| |||| Sbjct 1026878 GAGATGGTGTC-GAGGAGCTCGGAGCCGACGGG--GA-CGCCGAGGGCGGTGAGGTCGCA 1026823 Query 1726917 --GCAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTC 1726974 | | | ||||| |||| || | ||||| | | | |||| | || ||||||| ||| Sbjct 1026822 GAGGAGCTGGCGG-GCGAGGCGG--AGGCCTTTGTTGATGCGGAAGGAGCCGTCGATGTC 1026766 Query 1726975 GGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTT 1727019 ||||||| || ||||| ||||| ||||| ||||| || || || Sbjct 1026765 GGGGTCGTTGATGAGGCCTTTCCAGCCGACCGTCGTCCGGGGTTT 1026721 >seq8 Length=3112363 Score = 91.5 bits (100), Expect = 2e-12 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 || || ||||| |||| ||| ||| | |||||| | || ||||| ||||||||| Sbjct 1723973 CCAATCCCGCCAGCCGTTTTGCTGATCATCGCGCAGTCCTTCAGCGTCGAGTAGATGCCT 1723914 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 ||||| || || | |||||| ||| || ||||| || | |||||||| || || Sbjct 1723913 TCGATGGAATCATCTTTCATGGACACTAGGAAGCATGAGCTGAGTTGCGGGTTCGGAGTC 1723854 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAA 1630337 |||||||||||||| || |||| ||| |||||| Sbjct 1723853 CCGGCGTTGAAGAGAGTAGGCGACGCGTGGGTGAA 1723819 >seq10 Length=3045029 Score = 87.8 bits (96), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 ||||| || |||| || |||| |||||||| || |||||||| | | | ||||| | Sbjct 2290615 GCCTCAGTCGCGATACGCTCGAAGATGTCGTTCACGAACGAGTTGAGAATGGCCATCGCC 2290674 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||| ||||| ||| ||| |||||||||||||||||||| Sbjct 2290675 TTGTTTGAGATACCCGTGTCAGGGTGCACCTGCTTGAGCAC 2290715 >seq1 Length=4437623 Score = 86.0 bits (94), Expect = 8e-11 Identities = 114/155 (74%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095 || ||| ||| ||||| || |||||||| || ||||||| | | | ||| | Sbjct 622557 CCGGAGGCCCGTGGCTTCGTCGAGAACTCGTATCTCCGAGGCCTCACCCCCCAGGAGTT- 622615 Query 509096 TTTCTGCACATG--ATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCG 509153 ||||| | |||| || | || |||||||| ||| |||| || |||||||| || |||| Sbjct 622616 TTTCTTC-CATGCCATGGCTGGTCGCGAGGGTCTCATCGATACCGCCGTCAAAACCGCCG 622674 Query 509154 AGACGGGCTACATCCAGCGCCGGTGCATCAAGTCG 509188 |||| ||||||||||||||||| | ||||| || Sbjct 622675 AGACCGGCTACATCCAGCGCCGTCTCGTCAAGGCG 622709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138133159121