Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 138 9e-28 >seq1 Length=4437623 Score = 138 bits (152), Expect = 9e-28 Identities = 187/261 (72%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||| || || ||||||||||| | || || |||| ||| |||||| |||||| || Sbjct 409255 GATCAGGTCCGTCTCCGGGTTCTTGCACGCCTTGCACAGCACGAACTTGTCGATGAATCC 409196 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| ||||| || | | ||| | |||||| | ||||| |||||| | || ||||| Sbjct 409195 ATCGAGCAGCTCACGCAGCTTCTTAGCGTCGTGCGCCCCGTTCACGATGTACCGGTCGTT 409136 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 || | |||| | | || ||||| |||||||| || ||| |||| || ||||| Sbjct 409135 CTTCTCGTCGAGCGAGATCTGTGCGCCAAGCTCGCATCCAAAGAACTTGGTAGGGTACGC 409076 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 || ||| || | ||||| |||| |||| |||||| |||||| |||||||| || Sbjct 409075 GGGCGGTCGGCTGAGCGCGCGAGCGACGTCGGACATGTTCGGGATGACGGTCTTGATACC 409016 Query 34551 GTTGCCCTTTCCTTCGACCTT 34571 ||||||||| || |||| ||| Sbjct 409015 GTTGCCCTTACCCTCGATCTT 408995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841534590409