Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03]
13 sequences; 37,433,966 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 9e-28
>seq1
Length=4437623
Score = 138 bits (152), Expect = 9e-28
Identities = 187/261 (72%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370
||| || || ||||||||||| | || || |||| ||| |||||| |||||| ||
Sbjct 409255 GATCAGGTCCGTCTCCGGGTTCTTGCACGCCTTGCACAGCACGAACTTGTCGATGAATCC 409196
Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
||| ||||| || | | ||| | |||||| | ||||| |||||| | || |||||
Sbjct 409195 ATCGAGCAGCTCACGCAGCTTCTTAGCGTCGTGCGCCCCGTTCACGATGTACCGGTCGTT 409136
Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490
|| | |||| | | || ||||| |||||||| || ||| |||| || |||||
Sbjct 409135 CTTCTCGTCGAGCGAGATCTGTGCGCCAAGCTCGCATCCAAAGAACTTGGTAGGGTACGC 409076
Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550
|| ||| || | ||||| |||| |||| |||||| |||||| |||||||| ||
Sbjct 409075 GGGCGGTCGGCTGAGCGCGCGAGCGACGTCGGACATGTTCGGGATGACGGTCTTGATACC 409016
Query 34551 GTTGCCCTTTCCTTCGACCTT 34571
||||||||| || |||| |||
Sbjct 409015 GTTGCCCTTACCCTCGATCTT 408995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841534590409
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |