Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 183 5e-40 seq3 113 7e-19 seq10 89.7 8e-12 >seq6 Length=3889359 Score = 183 bits (202), Expect = 5e-40 Identities = 167/209 (80%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 || ||||||| |||| |||||| ||||||| |||||| |||||||||||||||| ||| Sbjct 955176 GAAGCCCGCCATGGCGTACTCGGACACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAG 955117 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 |||||||| ||||| | ||| || || | || |||||| |||||| |||||| Sbjct 955116 CGAGATCATGTCCATAAAGTCGAATGGATTCGTCGCGCCGTAGTGTTTCTCGTTCCCGAG 955057 Query 794012 --CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| ||||| ||||||||||||||||| |||||||| ||||||||| | |||||| Sbjct 955056 GGCGACG--AGCAGCCGGTCGGCGACGAATTCTATGTACTGACACATGAGGTCTGCGTTC 954999 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTC 794098 ||||| ||||| | ||| || |||| ||| Sbjct 954998 ATGCCAATGAGAGACACCGGAAGCGCCTC 954970 Score = 176 bits (194), Expect = 7e-38 Identities = 217/295 (74%), Gaps = 9/295 (3%) Strand=Plus/Plus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435 |||||| ||||| | |||||||||||||||||| ||||||| |||| ||| ||||| Sbjct 952292 GAGGCCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCAGAGAA 952351 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 |||||| ||||||||||| || ||| | || || || || || || | | | | || Sbjct 952352 AAAGATACCCTCGACGGCAGCGAAGGCTACAAGGCGTTCAGCGAAGG----CTGAC--TC 952405 Query 794496 TTTGTT---GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTC 794552 |||| |||||| | ||||| || ||||| ||| | | |||| | || || Sbjct 952406 CTTGTCCGAGATCCAGCGAAGAGCCCAATCAGCCTTCTTCTTAATGCAGGGGATAGTCTC 952465 Query 794553 GATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612 |||||| |||||||| || || | |||||||||| || |||||||||||||| Sbjct 952466 GATGGCATCGAAGAGGTGCTCGCGCTGTGCGGGGTCCTTGATATACGTGTCGATGAGGAG 952525 Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||||| ||||| ||||| ||||| || || |||||||||||| || |||||| Sbjct 952526 CGAGTACGTCTCAGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 952580 Score = 141 bits (156), Expect = 1e-27 Identities = 207/292 (71%), Gaps = 3/292 (1%) Strand=Plus/Minus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435 ||| || ||||| | |||||||||||||||||| ||||| || ||| || ||||| Sbjct 954758 GAGACCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATCGCGGCGAAGGACCCGGAGAA 954699 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 |||| ||||||||||||||| || ||||||| ||||| || || | | || | Sbjct 954698 GAAGACGCCCTCGACGGCGGCGAACGCGACGAGGCGCTCTGCGAA---GACGGAGCGCGA 954642 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 | | |||||| || ||||| || ||||| | || |||| | |||| ||| Sbjct 954641 GTCGGCGATCCAGCGCAGGGCCCAGTCGGCCTTGCGCGCGACGCAGGGGATGGTGTTGAT 954582 Query 794556 GGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 ||| || ||| | || | ||||| |||||| ||||||||||||||||| Sbjct 954581 CGCGTCGAACAGGAACGCGCGCTGCGCGGGGTCGCGGACGTACGTGTCGATGAGGAGCGA 954522 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| ||||| ||||| | ||| ||||| |||||||||||| || |||||| Sbjct 954521 GTACGTCTCCGAGTGCACGTTCTCGATCATGATCTGGAAGCCGTAGAAGCAG 954470 Score = 122 bits (134), Expect = 1e-21 Identities = 153/206 (74%), Gaps = 8/206 (4%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| |||||||||| || || ||| ||| ||| || ||||||||||| |||| || Sbjct 951880 TGACACCCGCCTTGGAGTAGTCAGACACACGCTTCTCAAAGAAGTTGGTCTTCCCCTGGA 951939 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTT--GGCCGTCAGGTAGTGCTTCTCGCACCC 794008 ||||||||| ||||| | ||| ||||| | ||| |||||||||||| || Sbjct 951940 GCGAGATCATGTCCATGAAGTCGAAGGGGTTCGTGACGT--TGTAGTGCTTCTCATCGCC 951997 Query 794009 GA--GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCG 794066 || |||||| || || ||||| |||||||| || |||||||| | ||| ||| | | Sbjct 951998 GAGGGCGACG--AGAAGACGGTCAGCGACGAACTCGATGTACTGACGCATCAGGTTCGAG 952055 Query 794067 TTCATGCCGATGAGCGCCACGGGCAG 794092 |||||||| |||||||| || || || Sbjct 952056 TTCATGCCAATGAGCGCGACCGGAAG 952081 Score = 89.7 bits (98), Expect = 8e-12 Identities = 146/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| | || || || || ||| || || | |||||||| ||||| ||| Sbjct 954466 GCCTCGGCGGCCTGCACTTCGTTGGAGAACCGCTCGACGAGGTTCTCGTTGACGATCCCG 954407 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || ||||||||| ||||||||||||| || ||||| |||||| | | ||||| Sbjct 954406 TCCGAGGCGGCGAAGAAGGCGAGGACGTAGGAGACGAAGTGCTGCTCGTTGGGGGTGAGC 954347 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | ||||| | |||| | |||||||| ||| ||| ||||||| ||||| Sbjct 954346 TTGGTCGTCCAGTCCATGAGGTCGTAGGAGAGGTCGATCTCTTCGACGGTCCAGAAGGAT 954287 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 || | ||| | |||||||||| ||||||| Sbjct 954286 GCTTGGGCGTCCTTGTACATCTGCCATATC 954257 >seq3 Length=2042872 Score = 113 bits (124), Expect = 7e-19 Identities = 239/346 (69%), Gaps = 13/346 (4%) Strand=Plus/Minus Query 2175024 AAGGTGTGTGGCTGCGCGGCGGTGCGCACGGCATCGA--GCGCCGTTGCCACGCTGCCGT 2175081 |||| ||| || | | ||||| ||||| ||| |||| ||| || | || |||||||| Sbjct 1027058 AAGGCGTGGGGGTTGGAGGCGGAGCGCATGGCGTCGACGGCGACG--GACATGCTGCCGT 1027001 Query 2175082 CGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCG-ACGCCATTTCGCGGTGCACC 2175140 | |||||||| || || |||| || || | | ||||| | || | |||||||| | | Sbjct 1027000 CTGTGCCGTTCTTGAAGCCGATGGGGAAGGAGA-CGCCGGAGGCGAGCTCGCGGTGGAGC 1026942 Query 2175141 TGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAATAGGGC 2175200 ||| |||||||||||| ||||| | ||||||||| | | |||||| || | || | Sbjct 1026941 TGGGACTCGGTGGTGCGGGCGCCGATGGCGCCCCAGGAGATGAGGTCGGCGATGTACTGG 1026882 Query 2175201 GCCACCAAAGGGCTGAGAAACTCGACAGCC-ACGGGCTGGCCGACGTCGACGACCAGGTC 2175259 | | | | ||| | |||| |||| ||||| ||||| | || | ||||| Sbjct 1026881 GGGGAGATGGTGTCGAGGAGCTCG-GAGCCGACGGGGACGCCGAGGGCGGTG---AGGTC 1026826 Query 2175260 GCGCAGCAGTCGACGCGATGTGGC-GAGGCCGGCGGCCAGGCGGCACGACCCGTCGAGGT 2175318 || || || | || | | ||| |||||| | | |||| | || ||||||| || Sbjct 1026825 GCAGAGGAGCTGGCG-GGCGAGGCGGAGGCCTTTGTTGATGCGGAAGGAGCCGTCGATGT 1026767 Query 2175319 CGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTT 2175364 |||||||| || ||||| ||||| ||||| ||||| || || || Sbjct 1026766 CGGGGTCGTTGATGAGGCCTTTCCAGCCGACCGTCGTCCGGGGTTT 1026721 >seq10 Length=3045029 Score = 89.7 bits (98), Expect = 8e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 ||| ||||||| ||| |||||||| |||| ||||||| |||| ||||| || | | ||| Sbjct 2290430 CTTCGTGACGGACTTCGTACCCTCAGAGATGGCGTGCTTGGCAAGTTCACCAGGGAGGAT 2290489 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCG 1485560 |||||| || || |||||||||||||| Sbjct 2290490 CAGGCGTACTGCCGTCTGGATCTCGCG 2290516 Score = 87.8 bits (96), Expect = 3e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||| || |||| || |||| |||||||| || |||||||| | || | ||||| Sbjct 2290615 GCCTCAGTCGCGATACGCTCGAAGATGTCGTTCACGAACGAGTTGAGAATGGCCATCGCC 2290674 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| ||| ||| |||||||||||||||||||| Sbjct 2290675 TTGTTTGAGATACCCGTGTCAGGGTGCACCTGCTTGAGCAC 2290715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245017130707