Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq9 140 2e-28 seq1 131 1e-25 >seq9 Length=3088601 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||||||||||||||| ||||| || ||||| || |||| |||| Sbjct 2856038 AGCACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCC 2856097 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| || || || |||||||| |||| | |||||||||||| Sbjct 2856098 TCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGGAATCCCCTCCTTGTCC 2856157 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | ||| || || | ||| |||||| Sbjct 2856158 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGGGTGATGGTC 2856217 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| |||||||||||||| Sbjct 2856218 TTCCCGGTCAGGGTCTTGACAAAGATCTGCAT 2856249 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| |||||||| || | || | || Sbjct 2856266 AGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGACCGTCT 2856325 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| |||||||| || |||||||| | || | || |||||||| Sbjct 2856326 TCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATACCTTCCTTGTCC 2856385 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || | ||||| || | || || ||| Sbjct 2856386 TGAATCTTCGCCTTGACATTGTCGATCGTGTCCGATGATTCGACCTCCAGAGTAATCGTC 2856445 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||||||||| || |||||||||||| Sbjct 2856446 TTACCCGTGAGGGTCTTGACGAAGATCTGCATG 2856478 Score = 107 bits (118), Expect = 1e-18 Identities = 155/215 (72%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 34768 GACCA-GGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGT 34826 ||||| |||| | ||||||||||||||| ||||| ||||| || ||| |||| | || | Sbjct 2856548 GACCAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCT 2856607 Query 34827 CCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGT 34886 ||| ||||| || || ||||| || || || || || | || | ||||||||||| | Sbjct 2856608 CCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCT 2856667 Query 34887 TTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATG 34942 || || ||||| || | ||||| || | |||||| || | || ||| Sbjct 2856668 GAATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATG 2856723 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || | |||||| |||||||||||||| Sbjct 2856724 GTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2856758 Score = 89.7 bits (98), Expect = 3e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||| ||||||||| ||||| |||||||| ||| ||||| | || || || Sbjct 2856837 AGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGCCCGTCCTCAAGC 2856896 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||| ||||| || ||||||||||| Sbjct 2856897 TGCTTCCCGGCAAAGATGAGACGTTGCTGGTC 2856928 >seq1 Length=4437623 Score = 131 bits (144), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||||| || ||||||||| ||||| || || || || | || |||| Sbjct 1911320 CAGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTACGGCCATC 1911261 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||| || ||||||||||| |||| | ||||||||||| Sbjct 1911260 CTCAAGCTGCTTGCCCGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTC 1911201 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || ||| ||||| | ||||||| || | ||| || || | ||| | Sbjct 1911200 TTGGATCTTTGCCTTGAC----GTTATCGATGGTGTCCGAAGACTCAACCTCGAGGGTGA 1911145 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | ||||| |||||||||||||| ||||||||||||||| Sbjct 1911144 TCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCATG 1911107 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| ||||| || || |||| | || Sbjct 1911827 AGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCGTCC 1911768 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || ||||| || ||||||| ||||||||||| |||| | || ||||| || Sbjct 1911767 TCAAGCTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCC 1911708 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || || |||||| || | || || ||| Sbjct 1911707 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTC 1911648 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| | ||||| || |||||||||||| Sbjct 1911647 TTGCCCGTCAAAGTCTTCACGAAGATCTGCATG 1911615 Score = 102 bits (112), Expect = 5e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||||||||||||| ||||| ||||| || || | || | || |||| Sbjct 1912049 AGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCCTCCAAC 1911990 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||| || || |||||||| | || | ||||||||||| | ||| Sbjct 1911989 TGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGTATC 1911930 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || || | |||| || | |||||| || | || || || || || Sbjct 1911929 TTCGCCTTCACATTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTTCCCG 1911870 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || ||||||||||| Sbjct 1911869 GTGAGCGTCTTAACGAAGATCTGCAT 1911844 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| |||||||| | | || | || || || ||||| || || ||| Sbjct 1911526 TCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAAGCTGCTTGCCAGCAAAG 1911467 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || || ||||| |||| | ||||||||||| | || || ||||| Sbjct 1911466 ATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTCGCCTTGACATTG 1911407 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || ||| || || | || || |||||||| || | ||||| || Sbjct 1911406 TCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCCGGTCAATGTCTTGACG 1911347 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 1911346 AAGATTTGCAT 1911336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692748398047