Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03]
13 sequences; 37,433,966 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq9 140 2e-28
seq1 131 1e-25
>seq9
Length=3088601
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | ||||||||||||||| ||||| || ||||| || |||| ||||
Sbjct 2856038 AGCACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCC 2856097
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| || || || |||||||| |||| | ||||||||||||
Sbjct 2856098 TCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGGAATCCCCTCCTTGTCC 2856157
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | ||| || || | ||| ||||||
Sbjct 2856158 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGGGTGATGGTC 2856217
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| ||||||||||||||
Sbjct 2856218 TTCCCGGTCAGGGTCTTGACAAAGATCTGCAT 2856249
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||| ||||| |||||||| || | || | ||
Sbjct 2856266 AGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGACCGTCT 2856325
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| |||||||| || |||||||| | || | || ||||||||
Sbjct 2856326 TCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATACCTTCCTTGTCC 2856385
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || | ||||| || | || || |||
Sbjct 2856386 TGAATCTTCGCCTTGACATTGTCGATCGTGTCCGATGATTCGACCTCCAGAGTAATCGTC 2856445
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| |||||||||||||| || ||||||||||||
Sbjct 2856446 TTACCCGTGAGGGTCTTGACGAAGATCTGCATG 2856478
Score = 107 bits (118), Expect = 1e-18
Identities = 155/215 (72%), Gaps = 9/215 (4%)
Strand=Plus/Plus
Query 34768 GACCA-GGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGT 34826
||||| |||| | ||||||||||||||| ||||| ||||| || ||| |||| | || |
Sbjct 2856548 GACCAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCT 2856607
Query 34827 CCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGT 34886
||| ||||| || || ||||| || || || || || | || | ||||||||||| |
Sbjct 2856608 CCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCT 2856667
Query 34887 TTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATG 34942
|| || ||||| || | ||||| || | |||||| || | || |||
Sbjct 2856668 GAATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATG 2856723
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || | |||||| ||||||||||||||
Sbjct 2856724 GTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2856758
Score = 89.7 bits (98), Expect = 3e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||| | |||| ||||||||| ||||| |||||||| ||| ||||| | || || ||
Sbjct 2856837 AGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGCCCGTCCTCAAGC 2856896
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| ||||| || |||||||||||
Sbjct 2856897 TGCTTCCCGGCAAAGATGAGACGTTGCTGGTC 2856928
>seq1
Length=4437623
Score = 131 bits (144), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 8/218 (4%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||||| || ||||||||| ||||| || || || || | || ||||
Sbjct 1911320 CAGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTACGGCCATC 1911261
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || |||||||| || ||||||||||| |||| | |||||||||||
Sbjct 1911260 CTCAAGCTGCTTGCCCGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTC 1911201
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || ||| ||||| | ||||||| || | ||| || || | ||| |
Sbjct 1911200 TTGGATCTTTGCCTTGAC----GTTATCGATGGTGTCCGAAGACTCAACCTCGAGGGTGA 1911145
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| ||||| |||||||||||||| |||||||||||||||
Sbjct 1911144 TCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCATG 1911107
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||| ||||| ||||| || || |||| | ||
Sbjct 1911827 AGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCGTCC 1911768
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || ||||| || ||||||| ||||||||||| |||| | || ||||| ||
Sbjct 1911767 TCAAGCTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCC 1911708
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || || |||||| || | || || |||
Sbjct 1911707 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTC 1911648
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| | ||||| || ||||||||||||
Sbjct 1911647 TTGCCCGTCAAAGTCTTCACGAAGATCTGCATG 1911615
Score = 102 bits (112), Expect = 5e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||| | |||||||||||||| ||||| ||||| || || | || | || ||||
Sbjct 1912049 AGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCCTCCAAC 1911990
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891
||||| || |||||||| || || |||||||| | || | ||||||||||| | |||
Sbjct 1911989 TGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGTATC 1911930
Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951
|| || || | |||| || | |||||| || | || || || || ||
Sbjct 1911929 TTCGCCTTCACATTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTTCCCG 1911870
Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| || |||||||||||
Sbjct 1911869 GTGAGCGTCTTAACGAAGATCTGCAT 1911844
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| |||||||| | | || | || || || ||||| || || |||
Sbjct 1911526 TCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAAGCTGCTTGCCAGCAAAG 1911467
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || || || ||||| |||| | ||||||||||| | || || |||||
Sbjct 1911466 ATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTCGCCTTGACATTG 1911407
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| || ||| || || | || || |||||||| || | ||||| ||
Sbjct 1911406 TCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCCGGTCAATGTCTTGACG 1911347
Query 34967 AAGATCTGCAT 34977
||||| |||||
Sbjct 1911346 AAGATTTGCAT 1911336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692748398047
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |