Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6 138 1e-27 seq9 131 2e-25 seq1 125 7e-24 seq12 86.0 6e-12 >seq6 Length=3889359 Score = 138 bits (152), Expect = 1e-27 Identities = 358/533 (67%), Gaps = 16/533 (3%) Strand=Plus/Minus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 ||||||||||||||| ||||||| |||||| ||||| || || ||||||||| ||||| Sbjct 954818 CAGGCACGCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAACGT 954759 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||| | ||| | |||||| |||| || ||||| ||| || || || Sbjct 954758 GAGACCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATCGCGGCGAAGGACCCGGAGAA 954699 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCG-TCTTGC 120817 ||| |||||||| ||| ||| || ||||| | |||||| || || | || | | | Sbjct 954698 GAAGACGCCCTCGACGGCGGCGAACGCGACGAGGCGCTCTGCGAA-GACGGAGCGCGAGT 954640 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGC-ACGCACGGCATCCGCTCGAAC 120876 | ||||||| || |||||| |||||| || |||| ||||| || || | || | Sbjct 954639 CGGCGATCCAGCGCAGGGCCCAGTCGGCC-TTGCGCGCGACGCAGGGGATGGTGTTGATC 954581 Query 120877 GCGTTCAGCAGCATGTCGCGCT-CGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATT 120935 |||| | ||| | |||||| ||| || | | || | |||||| || Sbjct 954580 GCGTCGAACAGGAACGCGCGCTGCGCGGGGTCGCGGACGTACGTG-TCGATGAGGAGCGA 954522 Query 120936 GTACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTC 120995 |||| | |||| ||||||| |||||||| | || | ||| ||| | ||||||| Sbjct 954521 GTACGTCTCCGAGTGCACGTTCTCGATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTC 954462 Query 120996 CAGCTCGGGCACCGCCCGCTGCATGTA---CTCGATAAGGTTAATATTCACGATACTGTC 121052 | |||| || || | | | ||||| ||||| || ||||| | ||| Sbjct 954461 GGCGGCCTGCAC--TTCGTTGGA-GAACCGCTCGACGAGGTTCTCGTTGACGATCCCGTC 954405 Query 121053 GGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTT 121112 | |||||||||||| || || |||| || ||||| |||||| | |||||||| Sbjct 954404 CGAGGCGGCGAAGAAGGCGAGGACGTAGGAGACGAAGTGCTGCTCGTTGGGGGTGAGCTT 954345 Query 121113 GTGCGCAAAATCGTCAT--AGTCCTTGGACAGGTCGACCTCCTCCACCTTCCA 121163 | || | || ||| ||| | ||| ||||||| ||| || || |||| Sbjct 954344 GGTCGTCCAGTC--CATGAGGTCGTAGGAGAGGTCGATCTCTTCGACGGTCCA 954294 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||| ||||| ||||| || ||||| || ||||||| | ||| || ||| ||| Sbjct 955161 GTACTCGGACACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCAT 955102 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 ||| ||||| || || ||||| ||| |||| | || | |||||||| || Sbjct 955101 AAAGTCGAATGGATTCGTCGCGCCGTAGTGTTTCTCGTTCCCGAGGGCGACGAGCAGCCG 955042 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 ||| || || || || ||||||| |||||| | ||||||||||| | | | ||| Sbjct 955041 GTCGGCGACGAATTCTATGTACTGACACATGAGGTCTGCGTTCATGCCAATGAGAGACAC 954982 Query 120534 CGGCAACGCC 120543 ||| | |||| Sbjct 954981 CGGAAGCGCC 954972 >seq9 Length=3088601 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || |||||||| | |||| ||| | |||||||||||||||| Sbjct 2856052 GGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGACCA-TCCTCGAGCTGCTTGC 2856110 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| ||||||| |||||||||||||| || || || |||||||| |||||| || Sbjct 2856111 CGGCGAAAATGAGGCGCTGCTGGTCGGGCGGAATCCCCTCCTTGTCCTGGATCTTGGCCT 2856170 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||| || || | ||||| ||| || |||||||| | Sbjct 2856171 TCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTCCCGGTCAGGG 2856230 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 2856231 TCTTGACAAAGATCTGCAT 2856249 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| || | | | | |||| ||| ||||||||||||| Sbjct 2856281 GTCGACTCCTTCTGGATGTTGTAGTC--CGAGAGAGTACGACCGTCTTCGAGCTGCTTGC 2856338 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || ||||||||||||||||| || ||||||||||| ||||| || Sbjct 2856339 CGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCCT 2856398 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | || || || | || | || || || || || | Sbjct 2856399 TGACATTGTCGATCGTGTCCGATGATTCGACCTCCAGAGTAATCGTCTTACCCGTGAGGG 2856458 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 2856459 TCTTGACGAAGATCTGCATG 2856478 >seq1 Length=4437623 Score = 125 bits (138), Expect = 7e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| ||| || ||| ||| |||||| || Sbjct 1911821 AAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACC-GTCCTCAAG 1911763 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || ||||| | || | ||| ||||||||||| |||||||||||||| || ||| Sbjct 1911762 CTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCCTGGAT 1911703 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||| | || ||| || || | |||| || ||||| Sbjct 1911702 CTTCGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTCTTGCC 1911643 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||| || ||||| ||||||||| Sbjct 1911642 CGTCAAAGTCTTCACGAAGATCTGCATG 1911615 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | || | | | ||||| ||||||||||| Sbjct 1911304 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTACGGCCA-TCCTCAAGCTGCTTGCC 1911246 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || |||||||| || ||||| || |||||||| ||||||| ||| Sbjct 1911245 CGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTT 1911186 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || |||| ||||| || ||||| || || || Sbjct 1911185 GACGTTATCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATCGTCTTGCCCGTGAGGGT 1911126 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 1911125 CTTGACAAAGATCTGCATG 1911107 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| || ||||| || || ||| ||| ||| || |||| Sbjct 1911539 ATGCAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAACGTCCGACC-GTCTTCAAGCT 1911481 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | ||||| ||||| ||||| || ||||| || |||||||| ||||| Sbjct 1911480 GCTTGCCAGCAAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCT 1911421 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| ||||| | || ||| || |||| |||| || || |||| Sbjct 1911420 TCGCCTTGACATTGTCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCCGG 1911361 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || ||||| || ||||| Sbjct 1911360 TCAATGTCTTGACGAAGATTTGCAT 1911336 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCG 133526 ||| ||||| || ||||| || || ||| ||| |||||| | |||||| || ||| Sbjct 1912035 CTCCTTCTGGATGTTGTAGTCAGACAGCGT--ACGGCCGTCCTCCAACTGCTTCCCAGCG 1911978 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | ||||| ||||||||||| || || ||||| |||||||| ||||| ||| | Sbjct 1911977 AAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGTATCTTCGCCTTCACA 1911918 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | || | ||| |||| | ||| || || | |||| ||||| ||||| || || || Sbjct 1911917 TTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTTCCCGGTGAGCGTCTTA 1911858 Query 133647 ACGAAAATCTGCAT 133660 ||||| |||||||| Sbjct 1911857 ACGAAGATCTGCAT 1911844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| | |||| |||||||||||||||||| Sbjct 3824911 GTAGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 3824970 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 ||| | || || |||||||||||||| ||||||| Sbjct 3824971 GCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGC 3825004 >seq12 Length=2614590 Score = 86.0 bits (94), Expect = 6e-12 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| |||| | || | | | |||||||||||||||| Sbjct 1420397 GGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCA-TCCTCGAGCTGCTTGC 1420339 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 ||||| |||| || |||||||||||||| || |||| Sbjct 1420338 CCGCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGC 1420303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420721444120