Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq9 114 8e-21 seq1 91.5 1e-13 >seq9 Length=3088601 Score = 114 bits (126), Expect = 8e-21 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || |||||||| |||||||| ||||| |||| ||||| || Sbjct 2856556 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCCAACTGC 2856615 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || ||||| || | |||||| ||||| | || | || || ||||| ||| || Sbjct 2856616 TTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 2856675 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | ||| ||| | ||||||| || || || || | |||||| || || || || Sbjct 2856676 GCCTTGA-CATTGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 2856734 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 || || || ||||||||||||||| Sbjct 2856735 CAAGGTCTTCACAAAGATCTGCATA 2856759 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | || ||||| ||| || || |||||||| || ||| Sbjct 2856251 CCACCACGCAGACGGAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2856310 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || | || || |||||||| |||| |||||||| || | || Sbjct 2856311 AGAGTACGACCGTCTTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGA 2856370 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| ||| ||| || | ||| ||| | ||||| |||||| || Sbjct 2856371 ATACCTTCCTTGTCCTGAATCTTCGCCTTGA-CATTGTCGATCGTGTCCGATGATTCGAC 2856429 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || ||||| ||||| || | || || || ||||||||||| Sbjct 2856430 CTCCAGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 2856477 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | || || |||||||| || || ||||||||||| ||||| ||||| | Sbjct 2856034 ACGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGACC 2856093 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || || | || || ||||| ||||| | |||||||| || |||| | || || || Sbjct 2856094 ATCCTCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGGAATCCCCTCCTT 2856153 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || ||| || | ||| | ||||| || || || || | |||| Sbjct 2856154 GTCCTGGATCTTGGCCTTC-ACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGGGTGA 2856212 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || || |||||||||||||| Sbjct 2856213 TGGTCTTCCCGGTCAGGGTCTTGACAAAGATCTGCAT 2856249 >seq1 Length=4437623 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || || ||| || || |||||||| ||||| Sbjct 1911843 ACCACCACGCAGACGGAGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGA 1911784 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | |||||||| ||||| ||||| || ||||| || |||| Sbjct 1911783 CAGAGTGCGACCGTCCTCAAGCTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGG 1911724 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || || ||| || | | | ||| | ||||| || || | Sbjct 1911723 GATGCCTTCCTTATCCTGGATCTTCGCCTTGA-CGTTGTCGATCGTGTCTGAGGACTCGA 1911665 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || || || || || ||||||||||| Sbjct 1911664 CTTCCAGAGTGATAGTCTTGCCCGTCAAAGTCTTCACGAAGATCTGCAT 1911616 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || |||||||| || || || || || |||| ||||| || Sbjct 1912046 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCCTCCAACTGC 1911987 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | |||||||| || | || | || || ||||| || ||| Sbjct 1911986 TTCCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGTATCTTC 1911927 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| |||| ||| | || ||| || || || || | ||||| ||||| || || Sbjct 1911926 GCCTTC-ACATTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTTCCCGGT 1911868 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | ||| || || |||||||||||| Sbjct 1911867 GAGCGTCTTAACGAAGATCTGCATA 1911843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703947920960