Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq3 122 3e-23 >seq3 Length=2042872 Score = 122 bits (134), Expect = 3e-23 Identities = 226/323 (70%), Gaps = 13/323 (4%) Strand=Plus/Minus Query 11634 ATCTACTTCCCCCACAACCTCGACTTCCGTGGCCGAGCCTACCCGGTGCCGGATGTCCTG 11693 |||||| |||| |||||| ||||||||||||| || || ||||| || || | || Sbjct 1540098 ATCTACCTCCCGCACAACGTCGACTTCCGTGGTCGGGCGTACCCCGTCCCTCCGCACTTG 1540039 Query 11694 AACCCGCAGGGCAGCGACCCCGTTAAGGCG--CTTCTCAGGTTCGCCGAGGGGAAGCCTC 11751 |||| ||| ||||| | | ||| || ||| |||| ||| |||||| | Sbjct 1540038 AACCACATCGGCGACGACCTC--TCCCGCGGACTGCTCCTCTTCGGTGAGTCGAAGCCGC 1539981 Query 11752 TCGGGGCGGATGGCGCGCGCTGGCTCATGATCCACGGCGCGAACACGTTCGGCATCGACA 11811 |||| || ||| ||||||||| | ||||||| ||| ||| | |||| ||||| Sbjct 1539980 TCGGCGCCCGCGGCCTGCGCTGGCTGAAGATCCACCTCGCCAACTTGGCCGGCTACGACA 1539921 Query 11812 AGGTGTCCTTCACCGAGCGCGTCGAGTGGGTTCAGGAG-AACTGGCGGCAGATCGTCCGG 11870 ||| | |||| |||||||||||||| || || ||| | || |||| | |||||| | Sbjct 1539920 AGGCGAGCTTCGACGAGCGCGTCGAGTTCGTGCACGAGCACCTCGCGG-ACATCGTC--G 1539864 Query 11871 TCAGC-ACGAG-ACCCGAT---TGGCAACCTGTGGTGGACCGAGGCAGACAAGCCGTGGT 11925 |||| |||| ||||| | ||||| | |||||||||| |||| ||| | |||||| Sbjct 1539863 ACAGCGCCGAGCACCCGCTCGACGGCAAGCGGTGGTGGACCAAGGCCGACGACCCGTGGC 1539804 Query 11926 GCTTCCTCGCGTTCTGCTTCGAG 11948 | |||||| ||| ||||| Sbjct 1539803 AGTGTCTCGCGACGTGCATCGAG 1539781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146175977434080