Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 232 1e-54 seq3 107 3e-17 >seq6 Length=3889359 Score = 232 bits (256), Expect = 1e-54 Identities = 363/511 (71%), Gaps = 14/511 (3%) Strand=Plus/Minus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| |||||||| || ||||||||||| ||||| |||||||| ||||| | | Sbjct 952796 GCAGATCTGGCAAATGTAC-AAGAAGGCCGAGGCATCCTTCTGGACCGCTGAGGAAATGG 952738 Query 1455832 ACCTCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCA 1455888 |||| | || | ||||| ||| | | | |||| || ||||| |||| Sbjct 952737 ACCTGTCCAAGGATCTGCATGACTGGAACAACCGCCTCAACAACGATGAACGCCACTTCA 952678 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || |||||| || || || || ||||||| ||| || ||||| ||||||||||| Sbjct 952677 TCTCGCACGTTCTGGCGTTCTT-CGCCGCCTCCGACGGTATCGTCAACGAGAACCTGGTA 952619 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || || || |||||||| | | ||||| || | || ||||| ||||||||| Sbjct 952618 GAGCGTTTCTCCAACGAGGTCCAGGCGGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATC 952559 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||| |||||||| || ||||||||||| |||||||| || |||||||| Sbjct 952558 ATGATGGAGAACATTCACTCTGAGACGTACTCGCTCCTCATCGACACGTATATCAAGGAC 952499 Query 1456069 CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 || | || || |||||||| |||||||| || | || | | | ||| ||| Sbjct 952498 CCCGCACAGCGCGAGCACCTCTTCGATGCCATCGAGACTATCCCCTGCATTAAGAAGAAG 952439 Query 1456129 GCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 || || ||||| | |||||| |||||||| || | ||| || || || | Sbjct 952438 GCTGATTGGGCTCTTCGCTGGATCTCGGACAAGGAG----TC-AGCCTTCGCTGAACGCC 952384 Query 1456186 TCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244 | || | ||| || | ||||||||| ||||||||||| ||| |||| | ||||||| | Sbjct 952383 TTGTAGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCTGGCTCTTTCGCCTCCATCTTCT 952324 Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||||||||||| | ||||| || || Sbjct 952323 GGCTCAAGAAGCGCGGCTTGATGCCTGGCCT 952293 Score = 188 bits (208), Expect = 1e-41 Identities = 348/505 (69%), Gaps = 8/505 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| | |||||| || | ||| | || ||||| ||||||| ||| ||| |||||| Sbjct 954257 GATATGGCAGATGTAC-AAGGACGCCCAAGCATCCTTCTGGACCGTCGAAGAGATCGACC 954315 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 || | |||| | ||||| | | ||| | | | |||||| || ||| || Sbjct 954316 TCTCCTACGACCTCATGGACTGGACGACCAAGCTCACCCCCAACGAGCAGCACTTCGTCT 954375 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||||||||| || ||||||| || || ||||| ||||||||| | || Sbjct 954376 CCTACGTCCTCGCCTTCTT-CGCCGCCTCGGACGGGATCGTCAACGAGAACCTCGTCGAG 954434 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || || || || || | ||||| || | || ||||| ||||||||| Sbjct 954435 CGGTTCTCCAACGAAGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATG 954494 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||| | ||||| || || ||||||||||| |||||||| |||||| ||||| Sbjct 954495 ATCGAGAACGTGCACTCGGAGACGTACTCGCTCCTCATCGACACGTACGTCCGCGACCCC 954554 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | || | ||| || ||| ||| |||| | || | || | |||||| Sbjct 954555 GCGCAGCGCGCGTTCCTGTTCGACGCGATCAACACCATCCCCTGCGTCGCGCGCAAGGCC 954614 Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCG 1456191 |||||||| || |||||| | | | || || ||| || ||||| ||||||| Sbjct 954615 GACTGGGCCCTGCGCTGGATCGCCGACTCGCGCTCCG--TCTTCGCAGAGCGCCTCGTCG 954672 Query 1456192 GCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCA 1456250 || |||| |||||||||| |||| ||||| || ||| ||| ||||| ||||||| Sbjct 954673 CGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGGTCCTTCGCCGCGATCTTCTGGCTCA 954732 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||||| | ||||| ||||| Sbjct 954733 AGAAGCGCGGCTTGATGCCTGGTCT 954757 Score = 158 bits (174), Expect = 2e-32 Identities = 164/210 (78%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624 ||| |||| |||||| | ||||| ||||||||||| | |||||||| |||||||| || Sbjct 954970 GAGGCGCTTCCGGTGTCTCTCATTGGCATGAACGCAGAC-CTCATGTGTCAGTACATAGA 955028 Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC 1456684 ||| ||||||||||| ||||||| || ||||| || |||| |||||| | || | Sbjct 955029 ATTC-GTCGCCGACCGGCTGCTCGTCGCCCTCGGGAACG-AGAAACACTACGGCGCGACG 955086 Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGC 1456744 || || ||| | ||||| ||||||||||| |||||||||||||||| |||||| Sbjct 955087 AATCCATTCGACTTTATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAG 955146 Query 1456745 CGCGTG-GCGAGTACGCCAAGGCCGGCGTC 1456773 |||||| ||||||||||| ||| ||| || Sbjct 955147 CGCGTGTCCGAGTACGCCATGGCGGGCTTC 955176 Score = 120 bits (132), Expect = 4e-21 Identities = 155/207 (75%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 || ||||| |||||||| ||||||||| | | | || ||| | |||||||| || || | Sbjct 952081 CTTCCGGTCGCGCTCATTGGCATGAACTCGAAC-CTGATGCGTCAGTACATCGAGTTC-G 952024 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC--AACC 1456688 |||| ||||| || |||| || |||||| | |||||||||||| ||| | |||| Sbjct 952023 TCGCTGACCGTCTTCTCGTCGCCCTCGGC-GATGAGAAGCACTACA--ACGTCACGAACC 951967 Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748 | ||| | ||||| ||||||||||| |||| ||||||||||| || ||| || | Sbjct 951966 CCTTCGACTTCATGGACATGATCTCGCTCCAGGGGAAGACCAACTTCTTTGAGAAGCGTG 951907 Query 1456749 TGGC-GAGTACGCCAAGGCCGGCGTCA 1456774 || | || ||| ||||||| || |||| Sbjct 951906 TGTCTGACTACTCCAAGGCGGGTGTCA 951880 >seq3 Length=2042872 Score = 107 bits (118), Expect = 3e-17 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||| || | ||||||||| |||| || |||||||||||| |||| | |||||| Sbjct 1026892 GCCGACCTCATCTCCTGGGGCGCCATCGGCGCCCGCACCACCGAGTCCCAGCTCCACCGC 1026951 Query 165810 GAGATGGCGT-CGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGT 165868 ||| | || | ||||| | | | ||||| |||||||| ||| |||| ||||||||| | Sbjct 1026952 GAGCTCGCCTCCGGCG-TCTCCTTCCCCATCGGCTTCAAGAACGGCACAGACGGCAGCAT 1027010 Query 165869 GGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTT 165916 | | ||| |||| ||| ||||| | ||| || | || ||| |||| Sbjct 1027011 GTCCGTCGCCGTCGACGCCATGCGCTCCGCCTCCAACCCCCACGCCTT 1027058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809946126106