Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq9 125 7e-24 seq1 125 7e-24 seq6 93.3 4e-14 seq12 86.0 6e-12 >seq9 Length=3088601 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||| | || || ||| ||| Sbjct 2856269 ACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGACCGTCTTCG 2856328 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| |||| |||||||| ||||| || || ||||| || || ||| Sbjct 2856329 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGA 2856388 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || ||||| || || |||||||| || ||| Sbjct 2856389 ATCTTCGCCTTGACATTGTCGATCGTGTCCGATGATTCGACCTCCAGAGTAATCGTCTTA 2856448 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 2856449 CCCGTGAGGGTCTTGACGAAGATCTGCAT 2856477 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||| ||||| || |||||||||||| | |||| || ||| || | | Sbjct 2856553 AGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCCAAC 2856612 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| ||||| || | |||||| ||||| || || ||||| || || || ||||| Sbjct 2856613 TGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATC 2856672 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | |||||||| || || || ||||| || ||||| || ||| Sbjct 2856673 TTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGGTCTTGCCG 2856732 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || ||||| Sbjct 2856733 GTCAAGGTCTTCACAAAGATCTGCAT 2856758 >seq1 Length=4437623 Score = 125 bits (138), Expect = 7e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||| || |||||||||||| | ||| || ||| || ||||| Sbjct 1911819 GTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCGTCCTCAAGCTG 1911760 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| ||||| || ||||| |||||||| |||||||| || || || || || Sbjct 1911759 TTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCCTGGATCTT 1911700 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||||| || || || || || ||||| || || || || || Sbjct 1911699 CGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTCTTGCCCGT 1911640 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| Sbjct 1911639 CAAAGTCTTCACGAAGATCTGCAT 1911616 Score = 123 bits (136), Expect = 3e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCGAG 134566 || || || || |||||||| ||||||||||||| || |||| || || ||| || || Sbjct 1911541 AGATGCAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAAC-GTCCGACCGTCTTCAAG 1911483 Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626 ||| ||||| ||||| || | |||||| || || ||||| || || || || ||||| || Sbjct 1911482 CTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGAT 1911423 Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACC 134686 || ||||| ||| | ||||| || || || || ||||| || || || || || Sbjct 1911422 CTTCGCCTTGACATTGTCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCC 1911363 Query 134687 GGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || || ||||| |||||||| Sbjct 1911362 GGTCAATGTCTTGACGAAGATTTGCAT 1911336 >seq6 Length=3889359 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 21718 AGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTG 21777 || || ||||| | |||||||| ||||| ||||| || || | |||||| ||||||| Sbjct 954817 AGGCACGCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAACGTG 954758 Query 21778 AGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaa 21837 ||||| ||||| || || || || || | | || || || || ||| ||||| || Sbjct 954757 AGACCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATCGCGGCGAAGGACCCGGAGAAG 954698 Query 21838 aaCACGCCCTCCACAATGGCGAACGCCACCATGCGC 21873 || |||||||| || ||||||||| || | |||| Sbjct 954697 AAGACGCCCTCGACGGCGGCGAACGCGACGAGGCGC 954662 >seq12 Length=2614590 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || ||||| ||||| || ||||||||||||| | ||| | Sbjct 1420417 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGG 1420358 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 || |||||||| ||||| || ||||||| |||||||| ||||| || |||| Sbjct 1420357 CCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGC 1420303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398317872760