Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 4e-15 >seq6 Length=3889359 Score = 96.9 bits (106), Expect = 4e-15 Identities = 169/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||| || ||||||||||| || || ||||| ||||| Sbjct 954811 GCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAACGTGAGACCA 954752 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | || |||||||| | |||||| ||||| || || || |||||||||| Sbjct 954751 GGCATCAAGCCGCGCTTCTTGAGCCAGAAGATCGCGGCGAAGGACCCGGAGAAGAAGACG 954692 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGGGACTTTGTATCA 130192 ||||| || |||||||| | ||| ||||| || || |||||| || | | | Sbjct 954691 CCCTCGACGGCGGCGAACGCGACGAGGCGCTCTGCGAAGACGGAGCGCGAGTCGG---CG 954635 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| || ||||| | ||||| | ||| || |||| ||| | |||||| || Sbjct 954634 ATCCAGCGCAGGGCCCAGTCGGCCTTGCGCGCGACGCAGGGGATGGTGTTGATCGCGTCG 954575 Query 130253 AAGAG 130257 || || Sbjct 954574 AACAG 954570 Score = 93.3 bits (102), Expect = 5e-14 Identities = 329/505 (65%), Gaps = 13/505 (3%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| || ||||||||||| || || |||||| || || ||||| | || |||||| Sbjct 952257 CCCTCATCGCGGGAGATGAGCTCGTTAGAGAAGGTGAGGCCAGGCATCAAGCCGCGCTTC 952316 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | || ||||||||||| ||||| ||||| || ||||| Sbjct 952317 TTGAGCCAGAAGATGGAGGCGAAAGAGCCAGAGAAAAAGATACCCTCGACGGCAGCGAAG 952376 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCATCGCCCAC 130210 || | || || ||||| |||| |||| |||| | | ||| | ||||| Sbjct 952377 GCTACAAGGCGTTCAGCGAAGG---CTGACTCCTTGTCCGAGATCCAGCGAAGAGCCCAA 952433 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | ||||| |||| || || |||| |||| ||| || || ||||| | || | | Sbjct 952434 TCAGCCTTCTTCTTAATGCAGGGGATAGTCTCGATGGCATCGAAGAGGTGCTCGCGCTGT 952493 Query 130271 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTC 130329 | || || ||||| ||| | || ||||| || || || || || | | | | Sbjct 952494 GCGGGGTCCTTGATATACGTGTCGATGAGGAGCGAGTACGTCTCAGAGTGAATGTTCTCC 952553 Query 130330 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAA 130389 || || | ||| | ||||||| ||||||| ||| ||| ||||| | || | | Sbjct 952554 ATCAT-GATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGCCGCCTGGACCTCGT-TGGAGA 952611 Query 130390 ATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 130448 | | | | | ||||| || || || ||||| | || || |||||||| | | Sbjct 952612 AACGCTCTACCAGGTTCTCGTTGACGATACCGTCGGAGGCGGCGAAGAACGCCAGAACGT 952671 Query 130449 ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCG 130505 | ||||| | |||||| | ||| | || | |||||||| | |||||||| | Sbjct 952672 GCGAGATGAAGTGGCGTTCATCGTTGTTGAGGCGGTTGTTCCAGTCATGCAGATCCTTGG 952731 Query 130506 AGAGATCTACCTCCTCCGCAGTCCA 130530 | || || | ||||| || ||||| Sbjct 952732 ACAGGTCCATTTCCTCAGCGGTCCA 952756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435099504280