Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq13 141 8e-29 >seq13 Length=2611572 Score = 141 bits (156), Expect = 8e-29 Identities = 237/340 (70%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177 ||||||||| |||| | ||||||||| | |||| |||| || | |||| | | Sbjct 30916 GGGGTTCCATGCGCTGAGGATGATGCGACGGTCTGTAGGGTCGTGCTTGATTTTGCGAAT 30857 Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACT 30236 | | || ||||| || || ||| | || |||||||| || | || |||| ||||| Sbjct 30856 GCACTCCTGGAGCTGGTCGACGCCCTTGCCGGAGTAGTCGGCGTCGCA-GTCCTCGTACT 30798 Query 30237 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30296 || || || |||| ||||||||| || || || || || ||||| ||||| | || Sbjct 30797 GCGCGCCAAAGTGCCGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGCGGT 30738 Query 30297 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356 | ||| ||| | ||| || | |||||| |||| ||||| ||||||||||||| || | Sbjct 30737 GTCCGAGGCCGCGCTTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGACGC 30678 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 | || | ||||||| |||||||| ||| | || || ||||| | |||||||| | Sbjct 30677 CTTTGGCGGAGAGCTGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTCCTCGA 30618 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||| | | ||| | |||||| ||||||||||| Sbjct 30617 CGATGCCGCGGAGGAAGGTGCGCTTGGTGGTGAGGAGGGG 30578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310335625196