Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq13 118 1e-21 >seq13 Length=2611572 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 34256 GGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCG 34315 ||| | ||||||||||| | ||||| ||| || |||| || |||| ||||||| Sbjct 30611 GGCATCGTCGAGGAGCTCATCTGGTTTGTGCACGGCTGCACGGACTCCAAACAGCTCTCC 30670 Query 34316 TCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG 34375 || || || ||||||||||||| |||| || |||||| || || ||||| || Sbjct 30671 GCCAAAGGCGTCAAGATCTGGGACGGGAACGGCTCCAAAGACTTCCTTGAAAAGCGCGGC 30730 Query 34376 TTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTT 34435 || | || ||||||||| | ||||| ||||| || ||||||||| | |||||| Sbjct 30731 CTCGGACACCGCCGCGAGGGCGACCTCGGCCCCGTCTATGGTTTCCAGTGGCGGCACTTT 30790 Query 34436 GGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAG 34495 || ||| |||| || |||| || ||||| || || |||| | |||||||| ||| Sbjct 30791 GGCGCGCAGTACGAGGACTGCGACGCCGACTACTCCGGCAAGGGCGTCGACCAGCTCCAG 30850 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 6850 CTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCC 6909 ||| |||||||| | |||| || || ||||| || |||| || |||| ||| || Sbjct 30850 CTGGAGCTGGTCGACGCCCTTGCCGGAGTAGTCGGCGTCGCAGTCCTCGTACTGCGCGCC 30791 Query 6910 AAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA 6969 |||||| | ||||||||| || ||||| ||||| | ||||||||| || | || Sbjct 30790 AAAGTGCCGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGCGGTGTCCGAG 30731 Query 6970 CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGA 7029 || ||||| || || |||||| || |||| ||||||||||||| || || || Sbjct 30730 GCCGCGCTTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGACGCCTTTGGC 30671 Query 7030 CGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCC 7089 ||||||| |||| || |||| || ||| ||||| | ||||||||||| | ||| Sbjct 30670 GGAGAGCTGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTCCTCGACGATGCC 30611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262327157360