Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 206 6e-48 seq9 185 2e-41 seq12 91.5 3e-13 >seq1 Length=4437623 Score = 206 bits (228), Expect = 6e-48 Identities = 173/212 (82%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||||||||| ||||| || |||||||| ||||| | ||| || | ||||| Sbjct 1911319 AGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTACGGCCATCC 1911260 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| |||||||| ||||| || || | || |||||||| Sbjct 1911259 TCAAGCTGCTTGCCCGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTCT 1911200 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| ||||||||||| || ||||||||||| ||||||||| Sbjct 1911199 TGGATCTTTGCCTTGACGTTATCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATCGTC 1911140 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| ||||| | |||||| Sbjct 1911139 TTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 1911108 Score = 141 bits (156), Expect = 2e-28 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || || || || || || || ||||| || |||| | |||| || ||||| | Sbjct 1911543 CAAGATGCAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAA 1911484 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| || ||||| || || |||||||| || || | || |||||||| |||| Sbjct 1911483 GCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGA 1911424 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || || || || ||||||||| ||||||||||| ||||||||||||| Sbjct 1911423 TCTTCGCCTTGACATTGTCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTC 1911364 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | ||||| || || | ||||| Sbjct 1911363 CGGTCAATGTCTTGACGAAGATTTGCAT 1911336 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| || || | || || | || || Sbjct 1911827 AGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCGTCC 1911768 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || || ||||| | ||||| ||||| || || | |||||||| ||| Sbjct 1911767 TCAAGCTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCC 1911708 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| ||| || || || |||||||| ||| Sbjct 1911707 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTC 1911648 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | |||||| || || | |||||| Sbjct 1911647 TTGCCCGTCAAAGTCTTCACGAAGATCTGCAT 1911616 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 |||| || | |||| ||||||| |||||| ||| || |||||||| || || | || Sbjct 1912066 TCAATGATGGCTTAC--CAAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAG 1912009 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | || || |||| |||||| || |||||||| ||||| || ||||| || |||| Sbjct 1912008 CGTACGGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAAT 1911949 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||| ||||| ||||| || ||||| || || || || ||||| Sbjct 1911948 GCCCTCCTTGTCCTGTATCTTCGCCTTCACATTGTCGATCGTATCGGAAGACTCGACCTC 1911889 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || || ||||| ||||| || || | |||||| Sbjct 1911888 CAATGTGATTGTTTTCCCGGTGAGCGTCTTAACGAAGATCTGCAT 1911844 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| ||||||||||| ||| || |||||| Sbjct 1910927 CCCTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCGATGGTGTCCGAGGACTCGACCTCG 1910868 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| || ||||||||||| || || | |||||| Sbjct 1910867 AGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 1910824 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || || || || |||||||| || |||| ||||||| ||||| Sbjct 1911091 AGGACGAGGTGCAGCGTAGATTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCATCC 1911032 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| ||||| || ||||| ||||| Sbjct 1911031 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGAGG 1910988 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || |||||||| || || || || | || || Sbjct 3824896 AGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 3824955 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| ||||| || ||||| || || Sbjct 3824956 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGG 3824999 >seq9 Length=3088601 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || |||||||| || |||| || || | || ||| Sbjct 2856266 AGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGACCGTCT 2856325 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| ||||||| |||||||||||| Sbjct 2856326 TCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATACCTTCCTTGTCC 2856385 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||| ||||| || ||| ||||| ||||| |||||| Sbjct 2856386 TGAATCTTCGCCTTGACATTGTCGATCGTGTCCGATGATTCGACCTCCAGAGTAATCGTC 2856445 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 2856446 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 2856477 Score = 178 bits (196), Expect = 3e-39 Identities = 173/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| || ||| ||| || |||||||| ||||||| || || Sbjct 2856028 ACGAAGACGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGT 2856087 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| ||||| || ||||| || ||||| || |||| || Sbjct 2856088 GCGACCATCCTCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGGAATCCC 2856147 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| |||||||| ||||| ||||| || |||||||| || Sbjct 2856148 CTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAG 2856207 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| ||||| || || || ||||| ||||| | ||||||| Sbjct 2856208 GGTGATGGTCTTCCCGGTCAGGGTCTTGACAAAGATCTGCATT 2856250 Score = 145 bits (160), Expect = 2e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| || ||| ||| || |||||||| || || | ||||| | || || |||| Sbjct 2856551 CAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCCA 2856610 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||||| || |||||||| || ||||| || || |||| || ||||||||||| | Sbjct 2856611 ACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAA 2856670 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || || ||||||||||| || || |||||||| ||||| ||||| | Sbjct 2856671 TCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGGTCTTGC 2856730 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | ||||| ||||| | |||||| Sbjct 2856731 CGGTCAAGGTCTTCACAAAGATCTGCAT 2856758 >seq12 Length=2614590 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||| |||||||| || || || || |||||||| ||| ||||||||| Sbjct 1420249 CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCG 1420190 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 || ||||| ||||| |||||||| ||||| || || | ||||||| || Sbjct 1420189 AGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATTCTA 1420142 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || ||||| || |||||||| || |||||||| || || ||||| Sbjct 1420421 ACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGT 1420362 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 | ||||| || ||||||||||| ||||| || ||||| || ||||| || |||| Sbjct 1420361 ACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGGGGAA 1420306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151806928745