Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq13 113 4e-20 >seq13 Length=2611572 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||||||||| || || || || || ||||| ||||| | ||| ||| | Sbjct 30789 AAGTGCCGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGCGGTGTCCGAGG 30730 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || | ||| || | |||||| |||| ||||| ||||||||||||| || || || || Sbjct 30729 CCGCGCTTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGACGCCTTTGGCG 30670 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 ||||||| |||||||| ||| | || || ||||| | |||||||| |||| | | Sbjct 30669 GAGAGCTGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTCCTCGACGATGCCG 30610 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 ||| | |||||| ||||||||||| Sbjct 30609 CGGAGGAAGGTGCGCTTGGTGGTGAGGAGGGG 30578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163135648518