Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq13 138 8e-28 >seq13 Length=2611572 Score = 138 bits (152), Expect = 8e-28 Identities = 236/340 (69%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||||||||| |||| | ||||||||| | |||| |||| || | |||| | | Sbjct 30916 GGGGTTCCATGCGCTGAGGATGATGCGACGGTCTGTAGGGTCGTGCTTGATTTTGCGAAT 30857 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACT 27502 | | || ||||| || || ||| | || |||||||| | | || |||| ||||| Sbjct 30856 GCACTCCTGGAGCTGGTCGACGCCCTTGCCGGAGTAGTCGGCGTCGCA-GTCCTCGTACT 30798 Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562 || || || |||| ||| ||||| || || || || || ||||| ||||| | || Sbjct 30797 GCGCGCCAAAGTGCCGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGCGGT 30738 Query 27563 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622 | ||| ||| | ||| || | |||||| |||| ||||| ||||||||||||| || | Sbjct 30737 GTCCGAGGCCGCGCTTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGACGC 30678 Query 27623 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 27682 | || ||||||||| |||||||| ||| | || || ||||| | |||||||| | Sbjct 30677 CTTTGGCGGAGAGCTGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTCCTCGA 30618 Query 27683 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||| | | ||| | |||||| ||||||||||| Sbjct 30617 CGATGCCGCGGAGGAAGGTGCGCTTGGTGGTGAGGAGGGG 30578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507141456203