Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 190 4e-43 seq9 170 4e-37 seq6 102 2e-16 seq12 95.1 3e-14 >seq1 Length=4437623 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | || || || |||||||||||||| | Sbjct 1911843 ACCACCACGCAGACGGAGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGA 1911784 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || ||||| || ||||||||||| ||||| ||||| ||| Sbjct 1911783 CAGAGTGCGACCGTCCTCAAGCTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGG 1911724 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || |||||||| || || ||| | ||||| ||||| || | ||||| Sbjct 1911723 GATGCCTTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGAC 1911664 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 1911663 TTCCAGAGTGATAGTCTTGCCCGTCAAAGTCTTCACGAAGATCTGCAT 1911616 Score = 178 bits (196), Expect = 3e-39 Identities = 154/191 (81%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| || | ||| || ||||||||||| || || || || || ||| Sbjct 1911298 TCCTTCTGGATGTTGTAATCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCCGCGAAG 1911239 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||||| ||||| ||| |||||||||||||||||||||||||| || ||| || Sbjct 1911238 ATGAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTTA 1911179 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| |||||||||| || || ||||| ||||||||||| ||||| | ||||| || Sbjct 1911178 TCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACA 1911119 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 1911118 AAGATCTGCAT 1911108 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || || ||||||||||| | | ||| || || || || || || || || ||||| Sbjct 1911527 TTCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAAGCTGCTTGCCAGCAAA 1911468 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | ||| |||||||| ||| ||||||||||||||||||||||| || || || | Sbjct 1911467 GATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTCGCCTTGACATT 1911408 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | || || ||||| ||||||||||| || ||||| ||||| || Sbjct 1911407 GTCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCCGGTCAATGTCTTGAC 1911348 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 1911347 GAAGATTTGCAT 1911336 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || || |||||||||||||||| ||||| ||||| ||||| | || ||||| Sbjct 1912040 GTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCCTCCAACTGCTTCCCA 1911981 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 || ||||| | || || ||||| ||||| ||||||||||| || ||||| || || Sbjct 1911980 GCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGTATCTTCGCCTTC 1911921 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | ||||| || || |||| ||||| || | ||||| || || || || | ||| Sbjct 1911920 ACATTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTTCCCGGTGAGCGTC 1911861 Query 283083 TTAACGAATATCTGCAT 283099 |||||||| |||||||| Sbjct 1911860 TTAACGAAGATCTGCAT 1911844 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | ||||| |||||||| | ||||| ||| Sbjct 1910927 CCCTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCGATGGTGTCCGAGGACTCGACCTCG 1910868 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| ||||| || || | |||||| ||||| |||||||| Sbjct 1910867 AGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 1910824 Score = 93.3 bits (102), Expect = 9e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| || ||||| || || || | ||||||||||| |||| || || || Sbjct 3825060 CCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATAGTGTCGGAAGACTCCACCTCA 3825119 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104 || ||||| ||||| ||||| | ||||| ||||| |||||||| |||| Sbjct 3825120 AGGGTGATGGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCATCTTCA 3825168 >seq9 Length=3088601 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || ||||| || || || | ||||| || || ||||||||||| || | Sbjct 2856022 ACCGCCACGAAGACGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGA 2856081 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| || || || ||||| || || | || || ||||| ||| Sbjct 2856082 GAGCGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGG 2856141 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || ||| | ||||| |||||||| | || || Sbjct 2856142 AATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAAC 2856201 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||| ||||| || |||| ||||| || || ||||||||| Sbjct 2856202 CTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTGACAAAGATCTGCATT 2856250 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || || || || | || || || |||||||||||||| | Sbjct 2856251 CCACCACGCAGACGGAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2856310 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || || || || ||||||||||||| || || ||||| ||| Sbjct 2856311 AGAGTACGACCGTCTTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGA 2856370 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| || ||||| || || || | ||||| |||||||| | |||||| Sbjct 2856371 ATACCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCGATCGTGTCCGATGATTCGACC 2856430 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| |||||||||||||| | ||||| ||||| |||||||| Sbjct 2856431 TCCAGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 2856477 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || || |||||||||||||| | || ||||| || ||||| | || || || Sbjct 2856562 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCCAACTGCTTGCCA 2856621 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 |||||||| | ||| ||||| || ||||| ||||||||||| || ||||| || || Sbjct 2856622 GCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 2856681 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | ||||| ||||| |||| ||||| ||||| ||||| ||||| || ||||| ||| Sbjct 2856682 ACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTCAAGGTC 2856741 Query 283083 TTAACGAATATCTGCAT 283099 || || || |||||||| Sbjct 2856742 TTCACAAAGATCTGCAT 2856758 Score = 84.2 bits (92), Expect = 5e-11 Identities = 83/106 (78%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 282890 TACC-AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 |||| || || || ||| || || |||||||||||||| | ||| ||||| || |||| Sbjct 2856832 TACCGAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGCCCGTCCT 2856891 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAAT 282994 | || || |||||||||||||| | |||||| |||||| ||||| Sbjct 2856892 CAAGCTGCTTCCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAAT 2856937 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | || || || ||||| | ||||| || Sbjct 2856990 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCA 2857049 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 2857050 AGCGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCAT 2857093 >seq6 Length=3889359 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || || |||||||| | | || ||| | || || ||||| ||||| ||||| ||| || Sbjct 952069 CTCATTGGCATGAACTCGAACCTGATGCGTCAGTACATCGAGTTCGTCGCTGACCGTCTT 952010 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || | ||||| || ||| || ||||||||||| || ||||| Sbjct 952009 CTCGTCGCCCTCGGCGATGAGAAGCACTACAACGTCACGAACCCCTTCGACTTCATGGAC 951950 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGT 230386 | || || ||||||||||| || |||||||| || |||||||| Sbjct 951949 ATGATCTCGCTCCAGGGGAAGACCAACTTCTTTGAGAAGCGTGT 951906 Score = 100 bits (110), Expect = 6e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 230222 TCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTAT 230281 ||| || |||||||| || || |||||| | || || || |||||||| || || || | Sbjct 954987 TCTCATTGGCATGAACGCAGACCTCATGTGTCAGTACATAGAATTCGTCGCCGACCGGCT 955046 Query 230282 TTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341 |||| || || ||| |||||||| || | | | ||| || |||| |||||||| Sbjct 955047 GCTCGTCGCCCTCGGGAACGAGAAACACTACGGCGCGACGAATCCATTCGACTTTATGGA 955106 Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGT 230386 | || || |||||||| || || ||||||||||| ||||| || Sbjct 955107 CATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGT 955151 >seq12 Length=2614590 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| || || || | || || |||||||| | || || ||| Sbjct 1420249 CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCG 1420190 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||| ||||| | ||||| ||||| ||||||||| Sbjct 1420189 AGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATT 1420145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739025652502