Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq9 165 6e-36 seq1 127 1e-24 >seq9 Length=3088601 Score = 165 bits (182), Expect = 6e-36 Identities = 178/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||| | | || ||||| || || |||||| ||||||||||| || Sbjct 2856247 CATTCCACCACGCAGACGGAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 2856306 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| || |||| || |||||||| ||||||||||||| |||||||| || | Sbjct 2856307 CGAGAGAGTACGACCGTCTTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGG 2856366 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 ||| | ||||||||| ||| |||||| ||| || ||| | || ||||| | ||| Sbjct 2856367 AGGAATACCTTCCTTGTCCTGAATCTTCGCCTTGACATTGT--CGATCGTGTCCGATGAT 2856424 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||| ||||||||||| |||||||||||||| |||||||| |||||| Sbjct 2856425 TCGACCTCCAGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATG 2856478 Score = 140 bits (154), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||||||||||| ||||||||||| |||| ||| ||| |||| |||| | Sbjct 2856553 AGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCCAAC 2856612 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || |||||||| | |||||| ||||| | || | || ||||| ||| ||| Sbjct 2856613 TGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATC 2856672 Query 44252 TTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 || ||| || ||| | |||||||||| || || ||||| | ||| || ||||| | Sbjct 2856673 TTGGCCTTGACATTGT--CGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGGTCTTGC 2856730 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | ||||||||| ||||| ||||| Sbjct 2856731 CGGTCAAGGTCTTCACAAAGATCTGCAT 2856758 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||||||||||| |||||||||||||| | ||| ||| | || || Sbjct 2856040 CACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTC 2856099 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| || || | |||||||| || | || | || ||||| ||| Sbjct 2856100 GAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGGAATCCCCTCCTTGTCCTG 2856159 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || ||||| | || || ||||||| || || ||||| Sbjct 2856160 GATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTT 2856219 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||| ||||| Sbjct 2856220 CCCGGTCAGGGTCTTGACAAAGATCTGCAT 2856249 >seq1 Length=4437623 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| ||||||||||| |||| || ||| |||| || Sbjct 1911824 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCGTCCTCA 1911765 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || ||||||||||| || ||||| || | || | |||||||| ||| Sbjct 1911764 AGCTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCCTGG 1911705 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||| | ||| || || |||| || || ||||| Sbjct 1911704 ATCTTCGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTCTTG 1911645 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | |||||||||||||| |||||| Sbjct 1911644 CCCGTCAAAGTCTTCACGAAGATCTGCATG 1911615 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||||||||||| ||||||||||| || | || || |||| |||| | Sbjct 1912049 AGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCCTCCAAC 1911990 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 |||||||| || ||||| | |||||||| || | || | || ||||| ||| |||| Sbjct 1911989 TGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGTATC 1911930 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||||| | | || || |||| || || ||||||| || || || || || Sbjct 1911929 TTCGCCTTCACATTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTTCCCG 1911870 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| |||||||| ||||| Sbjct 1911869 GTGAGCGTCTTAACGAAGATCTGCAT 1911844 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| |||||||||||||||| || || | || || Sbjct 1911316 ACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTACGGCCATCCTCA 1911257 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | || ||||| || | || | ||| ||||| || Sbjct 1911256 AGCTGCTTGCCCGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTCTTGG 1911197 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | ||| | |||||||| | || || ||||| | || |||||||| Sbjct 1911196 ATCTT-TGCCTTGACGTTATCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATCGTCTT 1911138 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| || ||||| |||||| Sbjct 1911137 GCCCGTGAGGGTCTTGACAAAGATCTGCATG 1911107 Score = 104 bits (114), Expect = 2e-17 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| || |||||||| || | | || |||| || |||||||| || |||||| Sbjct 1911526 TCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAAGCTGCTTGCCAGCAAAG 1911467 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264 || | |||||| || || | || | ||| ||||| || |||||| ||| || || Sbjct 1911466 ATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTCGCCTTGACATTG 1911407 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || ||||| | ||| || ||||| | ||| ||||||||||| || | ||||| | Sbjct 1911406 T--CAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCCGGTCAATGTCTTGA 1911349 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 1911348 CGAAGATTTGCAT 1911336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990342964021