Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq9 165 8e-36 seq1 141 9e-29 seq12 109 5e-19 >seq9 Length=3088601 Score = 165 bits (182), Expect = 8e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||| || ||||| |||||||||||||| ||||| || || ||| Sbjct 2856023 CCGCCACGAAGACGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAG 2856082 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||||||||| || |||||||| ||||| | ||| Sbjct 2856083 AGCGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGGA 2856142 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| ||| | | | ||||| |||||| || Sbjct 2856143 ATCCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATCGTGTCCGACGACTCAAC 2856201 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || ||||| ||||| || || |||||||| Sbjct 2856202 CTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTGACAAAGATCTGCAT 2856249 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || ||||| || ||||||||| ||||| ||||| ||| Sbjct 2856251 CCACCACGCAGACGGAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2856310 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||||||||||||||| || ||||||||||| ||||| | ||| Sbjct 2856311 AGAGTACGACCGTCTTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGA 2856370 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| | || || | || | | | ||||| || || || Sbjct 2856371 ATACCTTCCTTGTCC-TGAATCTTCGCCTTGACATTGTCGATCGTGTCCGATGATTCGAC 2856429 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || ||||| |||||||| || ||||| ||||| ||||||||| Sbjct 2856430 CTCCAGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATG 2856478 Score = 145 bits (160), Expect = 7e-30 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || || |||||||||||||| ||||| ||||||||||||||||| |||| || | | Sbjct 2856553 AGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCCAAC 2856612 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||| || || || || |||||||| |||| ||||| || |||||||||| ||| | Sbjct 2856613 TGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCC-TGAAT 2856671 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || || | || | | | |||||| ||||| ||||| | ||| || || || || Sbjct 2856672 CTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGGTCTTGCC 2856731 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| || || |||||||| Sbjct 2856732 GGTCAAGGTCTTCACAAAGATCTGCAT 2856758 >seq1 Length=4437623 Score = 141 bits (156), Expect = 9e-29 Identities = 157/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || ||||| |||||||||||||| ||||| ||||| || || || || |||| || | | Sbjct 1912049 AGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCCTCCAAC 1911990 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| || ||||| || |||||||| ||||||| ||||| || |||||||||| || | Sbjct 1911989 TGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGTAT 1911931 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || || | || | | | || ||| ||||| ||||||| || || ||||| || Sbjct 1911930 CTTCGCCTTCACATTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTTCCC 1911871 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||||||| ||||| |||||||| Sbjct 1911870 GGTGAGCGTCTTAACGAAGATCTGCAT 1911844 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| | || || || || || ||||||||| ||||| || ||||| Sbjct 1911334 CCGCCGCGGAGACGCAGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAA 1911275 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||| ||||| || ||||| || ||||||| || Sbjct 1911274 AGAGTACGGCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGTTGCTGGTCCGGCGGG 1911215 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || | ||||| | ||| | | ||||| ||||| || Sbjct 1911214 ATACCCTCCTTGT-CTTGGATCTTTGCCTTGACGTTATCGATGGTGTCCGAAGACTCAAC 1911156 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || ||||| || ||||| || || ||||||||| Sbjct 1911155 CTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCATG 1911107 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 |||||||| || |||||||||||||| ||||| || | || || |||| || ||| Sbjct 1911541 AGATGCAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAAGC 1911482 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||| || || || || ||||||||||||| || | | |||||||| | || | Sbjct 1911481 TGCTTGCCAGCAAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGT-CTTGGAT 1911423 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || || | || | | | |||||| ||||| ||||| | ||| ||||| || || Sbjct 1911422 CTTCGCCTTGACATTGTCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCC 1911363 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| ||||| || ||||| Sbjct 1911362 GGTCAATGTCTTGACGAAGATTTGCAT 1911336 Score = 102 bits (112), Expect = 8e-17 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | || || |||||||| |||||||| ||||| ||||| || Sbjct 1911107 GCCGCCACGGAGACGGAGGACGAGGTGCAGCGTAGATTCCTTCTGGATGTTGTAGTCCGA 1911048 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||| || | || |||||||||||||| ||||| ||||||||||| ||||| Sbjct 1911047 CAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTC 1910994 Score = 100 bits (110), Expect = 3e-16 Identities = 76/90 (84%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| |||||| ||| ||||| |||| |||||||||||||||||||| Sbjct 3824916 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3824975 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCT 41760 ||||||||||| ||||| | ||| | ||| Sbjct 3824976 GATCAGGCGCTGCTGGTCGGGGGGGATGCT 3825005 >seq12 Length=2614590 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || ||| ||||||||| ||||| |||||| | Sbjct 1420426 CCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTG 1420367 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || |||||||||||||| ||||| ||||||||||| ||||| | |||| Sbjct 1420366 AGGGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGGGGA 1420307 Query 41756 ACGCT 41760 | ||| Sbjct 1420306 ATGCT 1420302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303924875600