Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3662 102 1e-16 >seq3662 Length=107388 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 ||||| || ||| ||| | ||||||||||| || | ||| |||||||| ||||| Sbjct 75615 CATGCAAAGTCGGTGTGCATACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAGG 75674 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| | ||||||||| || ||||| ||||||| || || || || |||||||| Sbjct 75675 CCGGGCATCAAGCCACGCTTCTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAGAAG 75734 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAG 24283 || || || || || || || || | ||| Sbjct 75735 ATGCCCTCCACAGCGGCGAACGCTACAAG 75763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593682110092080