Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5274 152 6e-32 >seq5274 Length=138102 Score = 152 bits (168), Expect = 6e-32 Identities = 219/303 (72%), Gaps = 8/303 (3%) Strand=Plus/Plus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGG--GGTTCCT-CTTGATCTCC 145980 || ||||||||||||| ||||| || | | || |||| || || | |||||||| Sbjct 114942 GCGGGGTTCCAGGCGGAGAGGATGA---TACGGCGGTCGGTGGGATCGTGCTTGATCTTG 114998 Query 145981 CCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACG 146040 | || ||| |||||| || ||||| | || ||| || | | | | | || Sbjct 114999 CGGATGCACTCCTGGAGCTGATCGACGCCTTTGCCAGTGTAGTCCGCATCACAATTCTCG 115058 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC-CCCGGGCTC 146099 ||| ||||||||||||| ||||||||| || || ||||| || ||||| ||| || Sbjct 115059 TACTGCGCCCCGAAGTGCCGCCACTGGAAGCCATAAACGGGACCGAGGTCACCCTCGC-G 115117 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | ||| || || ||| | ||||||||| || ||| || ||| ||||||||||||| Sbjct 115118 TCGGTGTCCGAGACCGCGCTTGGCGAGGAATTCTTTGGAGCCATTGCCGTCCCAGATCTT 115177 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 ||||||| || ||||||||| || ||||| ||| | || ||||||||||||| ||||| Sbjct 115178 GACGCCCTTCACGGAGAGCTGCTTTGAGTCTGTGCAGCCGTTGATGAACCAGAGGAGCTC 115237 Query 146220 TTC 146222 ||| Sbjct 115238 TTC 115240 Score = 131 bits (144), Expect = 2e-25 Identities = 222/318 (70%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | |||| | ||| |||| ||||||||| | |||||||||| | Sbjct 114485 CATCTTCATCGCGATGCTGGGGTGCGGGTCGTAGCCCTCGACAACAAAGTCCTCGCTTCG 114544 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCT 145664 ||||||||| |||| |||||| | | || ||| |||| || |||||||| || Sbjct 114545 GAAGTCATCGATGTTTTCCACCTTGCGGGGCCACCGGAGTTTGGGGAACGGCCGGGG-CT 114603 Query 145665 CCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723 | | ||| ||||| ||| || | || ||||||| | |||||||||||||| || Sbjct 114604 CACGCTCAAGCTGGGTCTTGAGCGCGTCGACGTGGTCCCGATAGACGTGCGCGTCGCC-- 114661 Query 145724 GGACGTGGATGAAGTCCCCG---GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCA 145780 || ||||||| | | || || || | |||| |||||| ||||||| ||| | Sbjct 114662 -GAGCTGGATGATGAGCTCGTGTGGGACGGTATCGGTGACGTGGGCAACCATGTGGGTGA 114720 Query 145781 GCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGT 145840 | |||| |||| ||| || |||||||| | || || || | ||| | ||||| |||| Sbjct 114721 GGAGGGCGTAGGAGGCAATATTGAAGGGAATGCCGAGGCCGAGGTCGGCGGAGCGTTGGT 114780 Query 145841 ACAGCTGGCAGGAGAGCT 145858 ||| | ||| ||||||| Sbjct 114781 ACATCAAGCATGAGAGCT 114798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590037552516840