Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4520 98.7 8e-16 seq633 95.1 1e-14 >seq4520 Length=427429 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| || || | || || || ||||||| ||||| ||||| Sbjct 157905 GTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCCG 157846 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | | |||||||||| ||| | || |||||||| |||||| || Sbjct 157845 GCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTTTGCCTTG 157786 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||||| | ||| || | ||| || ||||||||||| ||||| Sbjct 157785 ACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACGTC 157726 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 157725 TTCACGAAGATTTGCAT 157709 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | || | ||| ||||||||||| ||||| || |||| Sbjct 158217 CCACCGCGCAGGCGGAGGACGAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGAA 158158 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||||| ||| ||||| || | ||||| | ||| ||||| || Sbjct 158157 AGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGCGGG 158098 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||| || || | | ||| || || | ||| Sbjct 158097 ATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACC 158038 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || ||||| ||||| || || ||||| Sbjct 158037 TCGAGGGTGATGGTCTTGCCAGTCAACGTCTTGACGAAAATCTGCAT 157991 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||| | ||| ||||||||||| ||||| ||||| | ||||| || | ||| Sbjct 157692 AGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGGCCATCC 157633 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| ||| | || || | |||||||| || | ||| |||||||| Sbjct 157632 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 157573 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | ||| || || | ||| || | || || ||| Sbjct 157572 TGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATCGTC 157513 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || |||||||| || ||||| Sbjct 157512 TTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 >seq633 Length=42484 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 20984 CTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATA 21043 |||||| || ||||| || || | ||||| || | ||||||| ||| ||||||||| | Sbjct 34897 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCAACTGCTTGCCCGCAAA 34956 Query 21044 AATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTG 21103 || || | |||||||||| || | || |||||||| |||||| || || | Sbjct 34957 GATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 35016 Query 21104 GCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 | ||| ||| || | ||| || | || |||||||||||||| || || ||||| Sbjct 35017 GTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAAGGTCTTGAC 35076 Query 21164 AAATATTTGCAT 21175 ||| || ||||| Sbjct 35077 AAAGATCTGCAT 35088 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| || |||||||| |||||||| || |||| ||||| | ||||||| ||||| Sbjct 35166 TGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGC 35225 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || || | || || | ||||||||| || | |||||||||||| |||||| Sbjct 35226 TTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTG 35285 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | ||| ||||| || ||| || | || |||||||||||||| Sbjct 35286 GCCTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTG 35345 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || || || || ||||| Sbjct 35346 AGGGTCTTCACGAAGATCTGCAT 35368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422231816622836