Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3662 370 1e-97 seq4520 136 4e-27 seq633 132 5e-26 seq145 125 7e-24 seq905 114 1e-20 seq2370 102 8e-17 >seq3662 Length=107388 Score = 370 bits (410), Expect = 1e-97 Identities = 476/653 (73%), Gaps = 9/653 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||||||| |||||||| | |||||| |||||||| Sbjct 77600 ATTTGGCAGATGTACAAGAAGGCTGAGGCGTCCTTCTGGACGGCTGAGGAGATGGACCTG 77659 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| |||||||| |||| || || |||||| | Sbjct 77660 TCCAAGGACCTCCACGACTGGAACAACCGCCTGAACGACGACGAACGTCACTTCATCTCG 77719 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || || || || ||| || |||||||||||||| || |||||||| Sbjct 77720 CACGTTCTCGCGTTCTTTGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTCGAGCGG 77779 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| |||| ||||||||| || |||||||||||||| |||||| ||| Sbjct 77780 TTCTCGAATGAGGTCCAGGCGGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 77839 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCG- 116929 |||||| | ||||| || | ||||| ||||||||||| ||| | | || ||| Sbjct 77840 GAGAACATCCACTCCGAGACTTATTCCCTTCTCATCGACACATACATCAAGGATCCTCGC 77899 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 || ||| || | || |||||||||| || || || || |||| ||||||| Sbjct 77900 CAGCGCGAGCACC---TCTTCGACGCCATCGATACCATTCCCTGTATCAAGAAGAAGGCG 77956 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| || | ||||||| ||| || ||| | || || | ||||| || || ||| Sbjct 77957 GACTGGGCTCTTCACTGGATCTCCGACAAGGAGTCTGCGTTTGCTGAGCGTCTCGTTGCC 78016 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| ||||||||||| ||||||| || ||| |||||| | || || ||| | ||| Sbjct 78017 TTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCTATCTTCTGGTTGAAG 78076 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || ||| | |||||||||||||| ||| |||||||||||| || | || ||||| Sbjct 78077 AAGCGTGGCTTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATATCTCGTGATGAGGGC 78136 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| |||||| ||||| | ||||||| || || | ||| || | ||| Sbjct 78137 ATGCACACCGACTTCGCCTGCCTCCTGTTCAGCCACCTGAAGAGGCGCCCTCACCCGGAC 78196 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 ||| | ||||| |||| || ||||| | || |||||| ||||| || Sbjct 78197 ATTGTCCGCCAGATCATCACAGAGGCGGTAGAGATTGAGCAGGAGTTCCTTAC 78249 Score = 342 bits (378), Expect = 5e-89 Identities = 413/560 (74%), Gaps = 9/560 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||||| || | ||||| |||||||| || || ||| | ||||| Sbjct 76171 ATATGGCAGATGTACAAAAATGCTCAAGCGTCCTTCTGGACGGTAGAAGAGATAGACCTC 76112 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 || | ||| | |||||||| ||| || || | |||||| || || |||||| Sbjct 76111 TCGCACGACCTCATGGACTGGGACCGCAAGTTAAATGCCAACGAACGGCACTTCATCTCC 76052 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||||| ||||| ||||||||| ||||||||||| |||||||| || || ||||| Sbjct 76051 TACGTGCTAGCCTTCTTCGCCGCCTCAGACGGCATCGTGAACGAGAACCTCGTTGAGCGG 75992 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| || | ||||| || | || ||||| || |||||||||||||| |||||| || Sbjct 75991 TTCTCTAACGAGGTCCAAGCCGCAGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATC 75932 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 ||||||||||| ||||| | ||| || |||||||||||||||| | | | | Sbjct 75931 GAGAACGTGCATTCGGAGACGTACTCCCTCCTCATCGACACGTACATCAAAGACCCCACT 75872 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 ||| | ||| | || |||||||||| || |||||||| |||| ||||||| Sbjct 75871 GAGCGCGCGTTCC---TCTTCGACGCCATCGACACCGTGCCGTGCATCAAGAAGAAGGCG 75815 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| || ||||||||||| | | | ||| |||| ||||| || || || Sbjct 75814 GACTGGGCCCTCCGCTGGATCGCGGACGAACGCTCCGTGTTCGCAGAGCGTCTTGTAGCG 75755 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| || || |||||| |||||||||| || |||||||||||||| ||||||||| Sbjct 75754 TTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTCTGGCTCAAG 75695 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || ||| | ||||||||||| || || ||| || || ||||| | ||||||||| Sbjct 75694 AAGCGTGGCTTGATGCCCGGCCTCACCTTTTCCAATGAACTGATCTCACGAGACGAGGGT 75635 Query 117170 CTGCATTGCGACTTTGCCTG 117189 |||| ||||||||| || Sbjct 75634 ATGCACACCGACTTTGCATG 75615 >seq4520 Length=427429 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||||||||| || ||||| |||| ||||| | | Sbjct 157481 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCTTCA 157540 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| ||||||||||| | |||||| Sbjct 157541 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 157600 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| || ||||| ||||| || || | || |||||| |||||||||| Sbjct 157601 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 157660 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| | || || ||||| || |||| Sbjct 157661 ATCCAAAAGGAGTCGACTCTTCATCTTGTCCTGCG 157695 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || ||||| ||||||||| |||| || || | || Sbjct 157991 ATGCAGATTTTCGTCAAGACGTTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 158050 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||| || | ||||| ||||| ||||| | ||||| Sbjct 158051 GACACGATCGACAACG-TCAAGGCAAAGATCCAAGACAAGGAGGGTATCCCGCCCGACCA 158109 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| ||| ||||| ||| |||| || | ||||| || || ||||| Sbjct 158110 ACAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTTTCGGATTACAA 158169 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||| |||||| | || || || || || | ||| || | || ||| Sbjct 158170 CATCCAAAAGGAGTCGACTCTTCACCTCGTCCTCCGCCTGCGCGGTGGC 158218 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| || || || ||||| | || || || || | Sbjct 158219 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAGACGATCACGCTAGAGGTTGAGTCCTCA 158278 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | || || |||||||| ||| |||| || Sbjct 158279 GACACGATCGACAACG-TGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCA 158337 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||| |||| |||| ||||| ||| |||||||| Sbjct 158338 GCAGCGGCTTATCTTCGCTGGAAAGCAGTTGGAGGACGGTCGCACGCTCTCTGACTACAA 158397 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| | ||||| || || Sbjct 158398 CATCCAGAAGGAGTCTACGCTCCACCT 158424 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||| || | ||||||||||| || |||| ||||||||| ||||| || |||| |||| Sbjct 157356 GCATTCCTCCCGACCAGCAACGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCA 157415 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGG 40912 | ||| |||||||||||||||||||||| | || || || || || | ||| | | | Sbjct 157416 CACTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGCCTCCGTG 157475 Query 40913 GCGG 40916 |||| Sbjct 157476 GCGG 157479 >seq633 Length=42484 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||||||||| || ||||| | || || || || | Sbjct 34752 ATGCAGATCTTCGTCAAGACGCTCACGGGCAAGACGATCACGTTGGAGGTTGAGTCCTCG 34693 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | |||| || || | ||||| ||||| ||||| | ||||| Sbjct 34692 GACACGATTGATAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCA 34634 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| || |||||||| Sbjct 34633 GCAGCGGCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTGTCGGACTACAA 34574 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||| || || || || Sbjct 34573 CATCCAGAAGGAGAGCACCCTTCACCTCGT 34544 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| |||||||| |||| ||||| | || Sbjct 35088 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 35029 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| ||||| || || ||||||| Sbjct 35028 GACACTATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 34970 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| |||||||| ||| |||| || | ||||||||| ||| ||||| Sbjct 34969 GCAGCGCCTGATCTTTGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTCTCCGATTACAA 34910 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| ||| || ||||| Sbjct 34909 CATCCAGAAGGAGAGCACCCTCCATCT 34883 >seq145 Length=336 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | ||||| || || ||||| |||| ||||| | | Sbjct 280 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACGATCACTCTCGAGGTCGAGTCGTCG 221 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| |||||||| || | |||||| Sbjct 220 GACACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCAG 161 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || |||| || |||||| || |||||| Sbjct 160 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTCTCGGATTACAAC 101 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | |||||||| || || Sbjct 100 ATCCAGAAGGAGTCGACGCTGCACCTTGT 72 >seq905 Length=41247 Score = 114 bits (126), Expect = 1e-20 Identities = 93/113 (82%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | || ||||| || || |||| ||||||||| ||||| || |||| |||| Sbjct 18916 GCATCCCCCCTGATCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCA 18975 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||| |||||||||||||||||||||| |||| || || || ||| | ||| Sbjct 18976 CCCTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGC 19028 >seq2370 Length=61181 Score = 102 bits (112), Expect = 8e-17 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | |||||||| || || |||| || ||||| ||||| || |||| |||| Sbjct 54585 GCATCCCCCCCGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCA 54644 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| | |||||||||||||||||||||| |||| || || || || Sbjct 54645 CCCTTAGCGACTACAACATCCAGAAGGAGTCCACCCTTCACCTTGT 54690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515184931482960