Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq633 127 2e-24 seq4520 109 4e-19 >seq633 Length=42484 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| ||||||||||| ||| ||| |||| || || || Sbjct 34549 GTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTG 34608 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| || | |||||| ||||| ||||| | ||||||||||||| || || Sbjct 34609 CTTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTT 34668 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||||| || |||||||||||||| Sbjct 34669 CGCCTTCACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTGCCCGT 34728 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 34729 GAGCGTCTTGACGAAGATCTGCATG 34753 >seq4520 Length=427429 Score = 109 bits (120), Expect = 4e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||| || || || || |||||||||||||||||| ||| || || |||| Sbjct 157920 ATACCGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCC 157861 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| || ||||| ||||| ||||| || || | |||||||||||| Sbjct 157860 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC 157801 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| ||| ||| || | | | | || ||| ||||| | ||| |||||| Sbjct 157800 TGAATCTTTGCCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTC 157741 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| |||| |||||||| ||||||||||| Sbjct 157740 TTGCCGGTCAACGTCTTCACGAAGATTTGCAT 157709 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||| || |||||||||||| || || | || || || || || ||||| || Sbjct 157672 CTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAA 157613 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || || ||||||||||| | |||||||||||| || || ||| || Sbjct 157612 GATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 157553 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | ||| ||||| | || |||||||||||||| || ||||| || Sbjct 157552 GTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGAC 157493 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 157492 AAAGATCTGCAT 157481 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||| || |||||||| || || |||| | || |||| || || |||||||| Sbjct 158182 CTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAA 158123 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | |||||||||||||| || | |||||||||||| || ||| ||| || Sbjct 158122 GATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTT 158063 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | ||| ||||| | ||| || |||||||| |||| ||||| || Sbjct 158062 GTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAACGTCTTGAC 158003 Query 45325 AAAGATTTGCATG 45337 || || |||||| Sbjct 158002 GAAAATCTGCATG 157990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395049579496741