Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3662 174 1e-38 seq4755 152 5e-32 seq4520 136 4e-27 seq145 107 2e-18 seq633 91.5 1e-13 >seq3662 Length=107388 Score = 174 bits (192), Expect = 1e-38 Identities = 382/565 (68%), Gaps = 13/565 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | ||||||||||| || |||| || || ||||| || ||||| ||||||| Sbjct 76171 ATATGGCAGATGTACAAAAATGCTCAAGCGTCCTTCTGGACGGTAGAAGAGATAGACCTC 76112 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGA--GAA----ATTTTATT 57683 || | || || | || ||||| || ||| | || | ||| | || || Sbjct 76111 TCGCACGACCTCATGGACTGGGA---CCGCAAGTTAAATGCCAACGAACGGCACTTCATC 76055 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 ||||| | || || |||||||| || || || || || |||||||| | || || Sbjct 76054 TCCTACGTGCTAGCCTTCTTCGCCGCCTCAGACGGCATCGTGAACGAGAACCTCGTTGAG 75995 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 | || || | || || |||| | ||||| | ||||| ||||| || || | Sbjct 75994 CGGTTCTCTAACGAGGTCCAAGCCGCAGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 75935 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863 || || ||||||||||| || | ||| || || |||||||| |||||| | || ||| | Sbjct 75934 ATCGAGAACGTGCATTCGGAGACGTACTCCCTCCTCATCGACACGTACATCAAAGACCCC 75875 Query 57864 GACGAGAAA-CGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 ||| ||| || ||| |||| ||||| || |||| ||| |||||||| Sbjct 75874 ACTGAGCGCGCGTTC-CTCTTCGACGCCATCGACACCGTGCCGTGCATCAAGAAGAAGGC 75816 Query 57923 AGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG-CCACGTTCGCCGAGAGGCTAATCG 57981 || ||| | || ||||| || ||| || |||||| ||| | || | | Sbjct 75815 GGACTGGGCCCTCCGCTGGATCGCGGACGA-ACGCTCCGTGTTCGCAGAGCGTCTTGTAG 75757 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 |||||||||| || || || || |||||||| || || || || ||||| ||| | | Sbjct 75756 CGTTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTCTGGCTCA 75697 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || ||| ||||||||||||| || ||| ||| || |||| || || ||||||| Sbjct 75696 AGAAGCGTGGCTTGATGCCCGGCCTCACCTTTTCCAATGAACTGATCTCACGAGACGAGG 75637 Query 58102 GTCTCCATACTGATTTTGCGTGCCT 58126 || | || || || ||||| ||||| Sbjct 75636 GTATGCACACCGACTTTGCATGCCT 75612 Score = 174 bits (192), Expect = 1e-38 Identities = 382/570 (67%), Gaps = 23/570 (4%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | || || | |||||| Sbjct 77600 ATTTGGCAGATGTACAAGAAGGCTGAGGCGTCCTTCTGGACGGCTGAGGAGATGGACCTG 77659 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTC---AAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || | || || || | | || || Sbjct 77660 TCCAAGGACCTCCACGACTGGAACAACCGCCTGAACGACGACGAACGTCACTTCATCTCG 77719 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | ||||| || || || ||||||||||| || |||||||| | ||||| | Sbjct 77720 CACGTTCTCGCGTTCTTTGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTCGAGCGG 77779 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | || || || | | | ||||| | ||||| ||||| || || | || Sbjct 77780 TTCTCGAATGAGGTCCAGGCGGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 77839 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA------- 57859 || ||| | || || || | ||||| || |||||||| || ||| | ||||| Sbjct 77840 GAGAACATCCACTCCGAGACTTATTCCCTTCTCATCGACACATACATCAAGGATCCTCGC 77899 Query 57860 CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAA 57919 || || |||| | || ||| |||| ||||| || || ||| ||| ||||| Sbjct 77900 CAGCG-CGAGCA------CCTCTTCGACGCCATCGATACCATTCCCTGTATCAAGAAGAA 77952 Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCT 57976 ||| || ||| | | | ||||| || || || | |||| || ||| | || Sbjct 77953 GGCGGACTGGGCTCTTCACTGGAT---CTCCGACAAGGAGTCTGCGTTTGCTGAGCGTCT 78009 Query 57977 AATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTG 58036 | || ||||| |||||||| ||||| ||||| || ||| ||| || | || || || Sbjct 78010 CGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCTATCTTCTG 78069 Query 58037 GATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGA 58096 | ||||||| || ||| |||||||||||||||| || ||||||| | ||||| || || Sbjct 78070 GTTGAAGAAGCGTGGCTTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATATCTCGTGA 78129 Query 58097 CGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 ||||| | || || || || || ||||| Sbjct 78130 TGAGGGCATGCACACCGACTTCGCCTGCCT 78159 >seq4755 Length=85889 Score = 152 bits (168), Expect = 5e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 |||||||| |||||||| || || ||||| || ||||||||||| |||||||| || ||| Sbjct 31481 AAAAGATCGGGTATCCAAAGCGCATAGAATAGATCGCGGGCGCGAACCTCCTCCTTTCCG 31540 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 |||||| | || | || || || ||||| || ||||||||||||||||| | | Sbjct 31541 TGGTTCTTGCGAAGGTCAATGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATG 31600 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || ||||| || | ||| ||||| ||||||||||||||||| || || | ||| Sbjct 31601 GCGAAAGCGCCGGGACGCTTGTTGCCACCCTGATCGACGTAACGAGCAGTAGCATCGTAT 31660 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || | | ||| || |||| |||||||| Sbjct 31661 ACCCGCAACATAGGGACGATGCCGTTGGA 31689 Score = 109 bits (120), Expect = 5e-19 Identities = 255/381 (67%), Gaps = 19/381 (5%) Strand=Plus/Plus Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564 ||| | || ||||| | || ||||| |||| ||||| ||| || || || |||||| Sbjct 30531 GTGTAAGGCTCGAAGCACTCGTTGTTACCCAAGATCTGGCTGGTAGAGGCAGTTGGCATC 30590 Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGAC 22624 ||||| | || |||||||| | | ||||||| || || || ||| || ||| | Sbjct 30591 GGCGCGAGTAGAAGCGAGTTCCGAAGCCCGTGCTGTGCAACCTTCGCCTTCAGGCTCGTC 30650 Query 22625 CAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGA 22684 |||||||| ||||| | |||||||| |||| | ||||| || | | ||| Sbjct 30651 CAGTCCCAAAGATCCGTAGGCGTCAC---CCCCCAGAGGTCGTACTGGAGCTTGCC---- 30703 Query 22685 CTC----GCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCA 22740 ||| || |||||||||| |||||| || || | || | | || | || || Sbjct 30704 CTCGGAAGCAGGGCTGCCTTGGTACGTCTCATAGGTGCCGAACTGCTGCGCCATCTCACA 30763 Query 22741 GCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA-ATTCGGCGG 22799 ||| ||||| | ||| ||| || || ||||| ||||| | | ||||| || ||| Sbjct 30764 GCTGGCCTCGACGGCGGCGTGGTAGATGGTCTCAAAGATCTGCAGGTTCAGCTTGCGCGC 30823 Query 22800 C---GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAA 22856 | || || ||| | ||||| || | || ||| ||||| |||| |||||| | Sbjct 30824 CTCAGGGGA----GTCGAAGGGCATGCGGAGGGCCATGAAGGCGTCGGCCAGACCCTGCA 30879 Query 22857 CGCCTATACCGATCGGTCGGT 22877 | || |||||||| || |||| Sbjct 30880 CACCGATACCGATGGGACGGT 30900 >seq4520 Length=427429 Score = 136 bits (150), Expect = 4e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| |||| ||||| || |||||| |||| ||||| | || Sbjct 157990 CATGCAGATTTTCGTCAAGACGTTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 158049 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| | ||||| || ||| | |||||||| || | |||||||||| Sbjct 158050 CGACACGATCGACAACGTCAAGGCAAAGA-TCCAAGACAAGGAGGGTATCCCGCCCGACC 158108 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | |||||||| || ||||| ||||| |||||||| || | ||| | ||||| | Sbjct 158109 AACAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTTTCGGATTACA 158168 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| ||||| || ||||||||||| || || || Sbjct 158169 ACATCCAAAAGGAGTCGACTCTTCACCTCGTCCT 158202 Score = 105 bits (116), Expect = 6e-18 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| |||| ||||| ||||||||| | || || || ||||| Sbjct 157709 ATGCAAATCTTCGTGAAGACGTTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCC 157768 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| || ||| | ||||||||| || | || || ||||| Sbjct 157769 GATACCATCGACAACGTCAAGGCAAAGATTCA-GGACAAGGAGGGGATTCCCCCGGACCA 157827 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || || || ||||| ||| | || ||| ||| || |||||| || Sbjct 157828 GCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACGTTGTCCGATTACAA 157887 Query 31372 CATTCAAAAAGAATCGACTCTTCATCT-GGTA 31402 |||||| || || || || ||||| || |||| Sbjct 157888 CATTCAGAAGGAGTCTACCCTTCACCTCGGTA 157919 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| |||||||| |||| || || | || Sbjct 157481 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCTTCA 157540 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| ||| | || ||||||||| Sbjct 157541 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 157600 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || ||||| ||| | || || || | ||| || ||| Sbjct 157601 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 157660 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || |||||||||||||| || || Sbjct 157661 ATCCAAAAGGAGTCGACTCTTCATCTTGTCCT 157692 >seq145 Length=336 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || |||||||| |||| || || |||| Sbjct 280 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACGATCACTCTCGAGGTCGAGTCGTCG 221 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| ||| | |||||||||||| Sbjct 220 GACACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCAG 161 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| ||| | || ||| || | ||||| ||| Sbjct 160 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTCTCGGATTACAAC 101 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || || || || || Sbjct 100 ATCCAGAAGGAGTCGACGCTGCACCTTGTCCT 69 >seq633 Length=42484 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| ||||| || ||||| |||| || || ||||| Sbjct 35088 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 35029 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| || || |||||||| || | || || |||||| Sbjct 35028 GACACTATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAG 34969 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || || || ||||| |||||||| || Sbjct 34968 CAGCGCCTGATCTTTGCGGGCAAGCAGTTGGAGGA 34934 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| |||| || || | || Sbjct 35369 CATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTC 35310 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| | || ||||||||||||| | || |||||||| Sbjct 35309 GGATACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCA 35250 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || ||||| || || ||| | || ||| Sbjct 35249 GCAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGAC 35213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445736750962320