Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3662 82.4 5e-11 >seq3662 Length=107388 Score = 82.4 bits (90), Expect = 5e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 22733 TCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTG 22792 ||||| ||||| | || || || ||||| || ||| || | ||||| ||||| || | Sbjct 75774 TCGCAGAGCGTCTTGTAGCGTTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTCG 75715 Query 22793 CGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGT 22852 | |||||||||||||| ||||| ||| | ||||| || | | |||||||| || Sbjct 75714 CCGCCATATTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTCACCTTTTCCAATGAAC 75655 Query 22853 TGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 |||| || ||||| ||| | ||| |||||||| || Sbjct 75654 TGATCTCACGAGACGAGGGTATGCACACCGACTTTGCATG 75615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356210498362363