Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5274 107 1e-18 >seq5274 Length=138102 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 25735 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTGCTCC 25793 || |||||||| || || | || | |||||| || ||| | | ||||| || || Sbjct 115011 TGGAGCTGATCGACGCCTTTGCCAGTGTAGTCCGCA-TCACAATTCTCGTACTGCGCCCC 115069 Query 25794 GAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAA 25853 ||| | || ||||||||| || || || || || ||||| || || | ||| | | Sbjct 115070 GAAGTGCCGCCACTGGAAGCCATAAACGGGACCGAGGTCACCCTCGCGTCGGTGTCCGAG 115129 Query 25854 GCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTC 25913 || | ||| | | || ||| |||| |||||| ||||||||||||| || |||||| | Sbjct 115130 ACCGCGCTTGGCGAGGAATTCTTTGGAGCCATTGCCGTCCCAGATCTTGACGCCCTTCAC 115189 Query 25914 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 25961 |||||||| || |||| |||| | || ||| |||||| || ||||| Sbjct 115190 GGAGAGCTGCTTTGAGTCTGTGCAGCCGTTGATGAACCAGAGGAGCTC 115237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340115542182933