Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq633 147 2e-30 seq4520 125 7e-24 seq145 109 5e-19 seq3662 95.1 1e-14 seq905 95.1 1e-14 seq2370 91.5 1e-13 >seq633 Length=42484 Score = 147 bits (162), Expect = 2e-30 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| |||||||||||||| | ||||||| |||||| |||||||| || Sbjct 35171 GGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTCCC 35230 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | |||||||||||| |||||||| ||||| ||||| ||| || ||| Sbjct 35231 GGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTT 35290 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | ||||| | |||||||| |||| || | ||| || ||||| || || Sbjct 35291 GACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGT 35350 Query 131217 TTTTACGAAAATCTGCATG 131235 || ||||| ||||||||| Sbjct 35351 CTTCACGAAGATCTGCATG 35369 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||||||| | |||||| ||||| | ||||||||| || | Sbjct 34897 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCAACTGCTTGCCCGCAAA 34956 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | ||||||||||||||||| || || || ||||| ||| ||| ||||| | Sbjct 34957 GATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 35016 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||| |||| ||||||| |||| || | ||| || ||||| | || || || Sbjct 35017 GTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAAGGTCTTGAC 35076 Query 131223 GAAAATCTGCAT 131234 || |||||||| Sbjct 35077 AAAGATCTGCAT 35088 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | || | ||| |||||| || |||||||| || Sbjct 34525 GCCACCACGGAGGCGAAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 34584 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 34585 CAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGG 34644 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||| | | || | || || | |||||| | Sbjct 34645 GATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTATCAATCGTGTCCGAGGACTCAAC 34704 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || || || || ||||| ||||||||| Sbjct 34705 CTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTGACGAAGATCTGCATG 34753 >seq4520 Length=427429 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || || || | || | |||||||||||||| ||||||||||| Sbjct 158218 GCCACCGCGCAGGCGGAGGACGAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGA 158159 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| | ||||||||| ||| |||| | |||||| ||||| || || Sbjct 158158 AAGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGCGG 158099 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 158098 GATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAAC 158039 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || | || || ||||||||||||||| Sbjct 158038 CTCGAGGGTGATGGTCTTGCCAGTCAACGTCTTGACGAAAATCTGCATG 157990 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| ||||||||||||||| || || || |||||| ||||||||||| Sbjct 157906 GGTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCC 157847 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CT 131155 || |||| || |||||||||||||| || || || || ||||| ||| | | || || Sbjct 157846 GGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTC-CTGAATCTTTGCCT 157788 Query 131156 TGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAG 131215 ||| | || | ||||||| ||||||| || | ||| | || || ||||| | | Sbjct 157787 TGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACG 157728 Query 131216 TTTTTACGAAAATCTGCAT 131234 | || ||||| || ||||| Sbjct 157727 TCTTCACGAAGATTTGCAT 157709 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || | ||| | |||||||||||||| |||||||| ||| Sbjct 157707 CCACCACGGAGACGCAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAG 157648 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || |||| | ||| |||||||| |||||| Sbjct 157647 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGG 157588 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||||| Sbjct 157587 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACC 157528 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || || || |||||||| Sbjct 157527 TCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| || | ||||| |||||| | |||||| || Sbjct 158415 GTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCCAACTGCTTTCCA 158356 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||| ||||| || || || || || || ||| ||| ||| Sbjct 158355 GCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGCCTTC 158296 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | |||||| | || | || | || || || || || || Sbjct 158295 ACGTTGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTCTTCCCTGTGAGCGTC 158236 Query 131218 TTTACGAAAATCTGCATG 131235 || ||||||||||||||| Sbjct 158235 TTGACGAAAATCTGCATG 158218 >seq145 Length=336 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | || | ||||||||||| || ||||||||||| Sbjct 53 GCCGCCGCGGAGACGGAGGACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGA 112 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 113 GAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGG 172 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||||| | || | || || | ||||||| Sbjct 173 AATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCCGACGACTCGAC 232 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || | || || ||||| |||||||| Sbjct 233 CTCGAGAGTGATCGTCTTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 280 >seq3662 Length=107388 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 ||||| |||||| | || || || || |||||||||| |||| ||||| || || Sbjct 75775 TTCGCAGAGCGTCTTGTAGCGTTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTC 75716 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 |||||||| || | |||| | ||| | ||||||||||| || ||| ||| || Sbjct 75715 GCCGCCATATTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTCACCTTTTCCAATGAA 75656 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC 46311 ||||| || || |||||||| |||| || |||||||| || ||| Sbjct 75655 CTGATCTCACGAGACGAGGGTATGCACACCGACTTTGCATGCCTC 75611 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 || || |||||| | || ||||| || || ||||| |||| || |||||| || Sbjct 77996 TTTGCTGAGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTC 78055 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 ||| | ||||| | | || | ||| | |||||||||||||| || ||||||| Sbjct 78056 GCCTCTATCTTCTGGTTGAAGAAGCGTGGCTTGATGCCCGGCCTGACCTTCTCCAACGAG 78115 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC 46311 || ||||| || || |||||| |||| || ||||| || || ||| Sbjct 78116 CTCATATCTCGTGATGAGGGCATGCACACCGACTTCGCCTGCCTC 78160 >seq905 Length=41247 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | ||| |||||||| || |||||||| ||||| Sbjct 19039 CCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTG 18980 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||| || || ||| Sbjct 18979 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCAGGGGGG 18920 Query 131128 AT 131129 || Sbjct 18919 AT 18918 >seq2370 Length=61181 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || |||||||| ||||| | |||||| |||||| ||||||||||| Sbjct 54679 GGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCGTCCTCAAGCTGCTTGCC 54620 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 || |||| | |||||||||||| || ||||| Sbjct 54619 AGCAAAGATCAGACGCTGCTGGTCGGGGGGGAT 54587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471981405248640