Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq125 102 1e-16 >seq125 Length=315652 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATT 15109 ||| |||| ||||||||||| ||| || | || ||||| || ||| || | Sbjct 28844 CCCCAGATCGGCGACAAGTTCGCTTCTCGTCACGGTCAGAAGGGTACCATCGGTATCACC 28903 Query 15110 TTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAAC 15169 | || |||||| |||||||| || ||||| ||||| ||||||||||| ||||||||| Sbjct 28904 TACCGCCAGGAGGACATGCCGTTCACCGCAGAGGGCATCACGCCCGACATCATCATCAAC 28963 Query 15170 CCCAACTGCATCCCGTCCCGCATGACCAT 15198 ||| || ||| |||||||| |||||||| Sbjct 28964 CCCCACGCCATTCCGTCCCGTATGACCAT 28992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611351334789600