Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3662 165 1e-35 >seq3662 Length=107388 Score = 165 bits (182), Expect = 1e-35 Identities = 346/506 (68%), Gaps = 15/506 (3%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||| ||||| || ||||| || || |||||| ||| || ||||| | || |||||| Sbjct 78135 CCCTCATCACGAGATATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAAGCCACGCTTC 78076 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 ||||||||||| || | || || || ||||||||||| ||||| || ||||| Sbjct 78075 TTCAACCAGAAGATAGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAG 78016 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGC-GACT--TTGT-GTCAAACCACTTCATCGCCCA 126240 |||| ||||||||||||||| ||| |||| |||| | | ||| | | ||||| Sbjct 78015 GCAACGAGACGCTCAGCAAA----CGCAGACTCCTTGTCGGAGATCCAGTGAAGAGCCCA 77960 Query 126241 CTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTT 126299 | |||||| |||| |||||| || | ||| | ||| || || ||||| | || | | Sbjct 77959 GTCCGCCTTCTTCTTGATACAGGGAATGGTATCGATGGCGTCGAAGAGGTGCTCGCGCTG 77900 Query 126300 CTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-T 126358 || ||||| |||||||| | || ||||| ||||| || ||| ||||| | | Sbjct 77899 GCGA-GGATCCTTGATGTATGTGTCGATGAGAAGGGAATAAGTCTCGGAGTGGATGTTCT 77841 Query 126359 TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCA 126418 ||| || | ||| | ||||||| | || || ||| ||| ||||||| | Sbjct 77840 CCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGCCGCCTGGACCTCATTCGAG 77782 Query 126419 AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATA 126478 || | || ||||| || || ||||||||| ||||||| ||||| || | Sbjct 77781 AACCGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCAAAGAACGCGAGAACG 77722 Query 126479 TACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTC 126535 | | ||||| | |||| | ||||||| || | |||||||||| || ||||| Sbjct 77721 TGCGAGATGAAGTGACGTTCGTCGTCGTTCAGGCGGTTGTTCCAGTCGTGGAGGTCCTTG 77662 Query 126536 GAGAGATCTACCTCCTCCGCAGTCCA 126561 || || || | |||||| || ||||| Sbjct 77661 GACAGGTCCATCTCCTCAGCCGTCCA 77636 Score = 122 bits (134), Expect = 1e-22 Identities = 201/288 (70%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||||||||| || ||||| |||||||| || ||| || || Sbjct 75618 GCAAAGTCGGTGTGCATACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAGGCCG 75677 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | || |||||||| | |||||| || || || || || || |||||||| Sbjct 75678 GGCATCAAGCCACGCTTCTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAGAAGATG 75737 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGCGACTTTGTGT-C 126222 ||||||||| |||||||| | |||||||| || || |||||| || || | Sbjct 75738 CCCTCCACAGCGGCGAACGCTACAAGACGCTCTGCGAACACGGAGCG----TTCGTCCGC 75793 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| | ||||| | |||||| |||| ||| ||||| ||||| | ||| || || Sbjct 75794 GATCCAGCGGAGGGCCCAGTCCGCCTTCTTCTTGATGCACGGCACGGTGTCGATGGCGTC 75853 Query 126283 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330 ||||| | || | || |||||||||||| | || ||||| Sbjct 75854 GAAGAGGAACGCGCGCTCAGTGGGGTCTTTGATGTACGTGTCGATGAG 75901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597313868518680