Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4755 107 2e-18 >seq4755 Length=85889 Score = 107 bits (118), Expect = 2e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 |||||||| ||| ||||||||| ||||||||||| | ||||| | | | | || Sbjct 31704 GGTACCAACGGCTATTCCAACGGCATCGTCCCTATGTTGCGGGTATACGATGCTACTGCT 31645 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 || ||||| || |||||||| | | | || ||||||| |||| |||||||| Sbjct 31644 CGTTACGTCGATCAGGGTGGCAACAAGCGTCCCGGCGCTTTCGCCATCTACCTCGAGCCG 31585 Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 |||||||| ||||| | ||||| ||||| || ||||||||||| || || || Sbjct 31584 TGGCACGCCGACGTCTTCGAGTTCATTGACCTTCGCAAGAACCACGGAAAGGAGGAGGTT 31525 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 | ||| | || || ||||| || || ||| | || || ||||| Sbjct 31524 CGCGCCCGCGATCTATTCTATGCGCTTTGGATACCCGATCTTTT 31481 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 95292 CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGAC 95351 ||||||||| |||||||||||| || || || || ||||||| |||||||||| Sbjct 30352 CAACGGCTCGGTCCAGAACATCGACATCATCCCCGACGATGTCAAGGCCATCTACAAGAC 30293 Query 95352 CGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411 ||| ||||||||| | ||| | | ||||||| ||| |||| ||| || | ||||| Sbjct 30292 CGTCTGGGAGATCTCCCAGAAGAAGGTCCTCGACCTCGCCGCCGACCGTGGTGCTTTCAT 30233 Query 95412 CTGCCAG 95418 ||||||| Sbjct 30232 CTGCCAG 30226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494690294723160