Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4520 116 4e-21 seq145 105 6e-18 seq633 102 8e-17 seq4755 87.8 2e-12 >seq4520 Length=427429 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | || ||||| ||||| || ||||| ||| Sbjct 157707 CCACCACGGAGACGCAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAG 157648 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || || |||| | || ||||| |||||||| Sbjct 157647 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGG 157588 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| ||| ||| | | |||| |||||| | | |||||| Sbjct 157587 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACC 157528 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| ||||| || || || || ||||| |||||||| Sbjct 157527 TCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 114 bits (126), Expect = 1e-20 Identities = 148/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| ||||||||| || ||| || || || ||||| || || Sbjct 157905 GTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCCG 157846 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || ||||||| |||||||| || || || || |||||||||||| ||| | | || ||| Sbjct 157845 GCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC-TGAATCTTTGCCTT 157787 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| ||| || | |||||| || | ||| | ||| |||||||||| | Sbjct 157786 GACGTTG-TCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACG 157728 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || || ||||| Sbjct 157727 TCTTCACGAAGATTTGCAT 157709 Score = 107 bits (118), Expect = 2e-18 Identities = 154/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 126904 CACCAAA-TGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGT 126962 |||||| || | ||||||||| || || || ||||| || | ||||||| || | Sbjct 158429 CACCAAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCT 158370 Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022 | | ||| ||||||||| |||| | ||||||||||| || || ||||||||||| ||| Sbjct 158369 CCAACTGCTTTCCAGCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCT 158310 Query 127023 TGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||| ||| ||| | ||||| ||| ||||| | ||| || || | || | ||| Sbjct 158309 GGATCTTCGCCTTCACGTTGT-CGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTC 158251 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || || || || || || |||||||||||| Sbjct 158250 TTCCCTGTGAGCGTCTTGACGAAAATCTGCATG 158218 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || |||||||| | |||||| ||| || | ||| || || Sbjct 158187 GTCGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCCAACTGCTTGCCG 158128 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| || ||||| || || ||||||||||| ||| || |||| Sbjct 158127 GCGAAGATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTTG 158068 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||||| | | ||| || |||| ||| | || ||||| |||| || Sbjct 158067 ACGTTGT-CGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAACGT 158009 Query 127096 TTTTACAAAAATCTGCATG 127114 || || |||||||||||| Sbjct 158008 CTTGACGAAAATCTGCATG 157990 >seq145 Length=336 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || |||||||| | || || || || ||||| || || Sbjct 83 CGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCGTCCTCAAGCTGCTTGCC 142 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| |||| | |||||||| ||||| || ||||||||||||||| ||| ||| ||| Sbjct 143 AGCGAAGATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 202 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || | |||| ||||||| |||||| |||| || | ||| || || |||| || Sbjct 203 GACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAGGT 262 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 263 CTTGACGAAGATCTGCAT 280 >seq633 Length=42484 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||||||| | ||||| ||| || | ||| || || || | Sbjct 34897 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCAACTGCTTGCCCGCAAA 34956 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||||| |||||||| || ||||| || ||||||||||| ||| ||| ||||| ||| Sbjct 34957 GATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 35016 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| ||||| | |||||| |||| || | || |||||||||| || || | Sbjct 35017 G-TCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAAGGTCTTGA 35075 Query 127101 CAAAAATCTGCAT 127113 |||| |||||||| Sbjct 35076 CAAAGATCTGCAT 35088 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| || || |||||| || || ||||| || || ||| | Sbjct 34561 CTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 34620 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | |||||||| || ||||| || |||||||||||| ||| ||| ||| | | Sbjct 34621 GATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 34680 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||||||| ||| || || | || | ||| ||||| || || || || || Sbjct 34681 ATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTGAC 34740 Query 127102 AAAAATCTGCATG 127114 || ||||||||| Sbjct 34741 GAAGATCTGCATG 34753 >seq4755 Length=85889 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 |||||||||||||| |||| || ||||| || ||||||||| |||||||||||||| Sbjct 30079 GTCGACGGTGAACTTGATCGCCTGCGCGGCGGGGCGTGTGCGCAGGTAGTACATGCCGGT 30138 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA 145819 |||||| |||| ||| ||| ||||| ||||||| || Sbjct 30139 CTTGAGACCCTTCTTCCAACCGTAGAAGTGCATGCTCGTCA 30179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475469173253040