Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3662 141 1e-28 seq4755 96.9 6e-15 >seq3662 Length=107388 Score = 141 bits (156), Expect = 1e-28 Identities = 369/557 (66%), Gaps = 17/557 (3%) Strand=Plus/Plus Query 159830 AGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCCC 159889 || ||||||||||||||||| || |||||||| | ||| || || |||| | Sbjct 75525 AGGAACTCCTTCTCAATCTCTACGGCTTCGGTGATAATGCGCAGGATCCGTTTG------ 75578 Query 159890 GGCT-TGCCCAA--AATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 || | || || | | | ||| | || |||||||| ||||||||| ||||| ||| Sbjct 75579 GGATGTGGCCGACGACGGAGGTGGTGGAATAGGAGGCATGCAAAGTCGGTGTGCATACCC 75638 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| || ||||| | || ||||| | | ||||||| ||||| | |||||| ||| Sbjct 75639 TCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAGGCCGGGCATCAAGCCACGCTTCTTG 75698 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 ||||| || ||||| || || | ||| ||| ||||| |||||||| || || ||||| Sbjct 75699 AGCCAGAATATGGCGGCGAACGACCCGGAAAAGAAGATGCCCTCCACAGCGGCGAACGCT 75758 Query 160067 ACGAGCCTCTCACCAAAAGAGG--CGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124 || || | ||| | || || |||| || | | |||| | |||||| || | Sbjct 75759 ACAAGACGCTCTGCGAACACGGAGCGTTCGT--CCGCGATCCAGCGGAGGGCCCAGTCCG 75816 Query 160125 CCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCA 160184 ||||||| ||||||||||| | |||| ||||| || | | |||| | Sbjct 75817 CCTTCTTCTTGATGCACGGCACGGTGTCGATGGCGTCGAAGAGGAACGCGCGCTCAGTGG 75876 Query 160185 CATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGG 160244 || ||||| || | || || |||||| | || | ||||| || ||||| Sbjct 75877 GGTCTTTGATGTACGTGTCGATGAGGAGGGAGTACGTCTCCGAATGCACGTTCTCGATCA 75936 Query 160245 CCATCTGAAAGTTGTAGAAATATGTCGCCTC--CAGATACTGCACCTCCTGTGTGAACCT 160302 ||||| ||| |||||| | ||||| | | | || ||||| | | ||||| Sbjct 75937 TGATCTGGAAGCCGTAGAAGCAGCGGGCCTCTGCGGCT--TGGACCTCGTTAGAGAACCG 75994 Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362 | | | || || | || || | ||||| | ||| || ||||| || | ||||| || Sbjct 75995 CTCAACGAGGTTCTCGTTCACGATGCCGTCTGAGGCGGCGAAGAAGGCTAGCACGTAGGA 76054 Query 160363 GATGAAATGTCTCTCGT 160379 |||||| || | |||| Sbjct 76055 GATGAAGTGCCGTTCGT 76071 Score = 100 bits (110), Expect = 5e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 ||||||||||| || |||||| ||||| ||||| || ||||| |||| ||||||||| Sbjct 78165 AACAGGAGGCAGGCGAAGTCGGTGTGCATGCCCTCATCACGAGATATGAGCTCGTTGGAG 78106 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | ||||| ||||| | |||||| || | ||| || || | || || | || Sbjct 78105 AAGGTCAGGCCGGGCATCAAGCCACGCTTCTTCAACCAGAAGATAGAGGCGAAGGAGCCA 78046 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 || ||||| ||||| ||||| || || || ||||| | |||| |||| Sbjct 78045 GAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTCAGCAAA 77996 >seq4755 Length=85889 Score = 96.9 bits (106), Expect = 6e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 203841 TGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGG 203900 |||| || ||||||| || || | | |||| || | | | ||| ||||||||||||| Sbjct 30078 TGTCGACGGTGAACTTGATCGCCTGCGCGGCGGGGCGTGTGCGCAGGTAGTACATGCCGG 30137 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| || ||||||| ||| ||||| | ||||||| | ||||| || | | | ||| Sbjct 30138 TCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATGCTCGTCAGTTGGCCCGTGGTAGGGG 30197 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCA 204020 | || ||| | ||| || || || ||| |||||||| | || || ||||| | Sbjct 30198 CCTGCAGGTGGACGTTGAGGGATTGAGACTGGCAGATGAAAGCACCACGGTCGGCGGCGA 30257 Query 204021 TATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | || | ||||||| || |||||||| || |||||| Sbjct 30258 GGTCGAGGACCTTCTTCTGGGAGATCTCCCAGACGGTCTTG 30298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795102312239760