Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq633 140 4e-28 seq4520 132 5e-26 seq145 131 2e-25 seq905 84.2 2e-11 >seq633 Length=42484 Score = 140 bits (154), Expect = 4e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| |||||||| || || ||||| |||| || |||||||||||| Sbjct 34556 GTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTGCTTGCCG 34615 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | ||||||||||| | || | | |||||||||| ||||||| ||| Sbjct 34616 GCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTC 34675 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | |||||| || || || |||| |||||| || |||||||| ||||| Sbjct 34676 ACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTGCCCGTGAGCGTC 34735 Query 46577 TTAACAAAGATTTGCAT 46593 || || ||||| ||||| Sbjct 34736 TTGACGAAGATCTGCAT 34752 Score = 132 bits (146), Expect = 5e-26 Identities = 159/212 (75%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 46384 CACC-AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGT 46442 |||| ||||| | || |||||||| ||||| ||||| ||||| || ||||| | || | Sbjct 34878 CACCGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 34937 Query 46443 CGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCA 46502 | | ||||||||| || || |||| |||||||||||| | || | | ||||||||| Sbjct 34938 CCAACTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTT 34997 Query 46503 TGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 ||||||| ||||| ||| | | | |||||| ||| || || || | |||||||| Sbjct 34998 GGATCTTCGCCTTGA-CGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTC 35056 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||| || || |||||||| ||||| Sbjct 35057 TTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 35088 Score = 120 bits (132), Expect = 3e-22 Identities = 156/212 (74%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 46384 CACC-AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGT 46442 |||| || |||| ||| |||||| || || ||||| || || || |||||| |||| | Sbjct 35158 CACCGAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCT 35217 Query 46443 CGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCA 46502 | |||||||| |||||||| || | ||||||||||||| || | || ||||||||| Sbjct 35218 CAAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCT 35277 Query 46503 TGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 |||||| ||||| ||| | | | || || || || || || | ||||||||| Sbjct 35278 GGATCTTGGCCTTGA-CGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTC 35336 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| ||||| Sbjct 35337 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 35368 >seq4520 Length=427429 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || ||||| | || |||||||||||| ||||||||||| || || || | Sbjct 157696 ACGCAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGGCC 157637 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || ||||||||||||||||| || || | || |||||||||| || | || |||||| Sbjct 157636 ATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTT 157577 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||||| ||| | | | | ||||| || || || || | |||||| Sbjct 157576 GTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGAT 157517 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || || |||||||| ||||| Sbjct 157516 CGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || || |||||||| | || || | ||||||||||||||| Sbjct 158182 CTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAA 158123 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| ||||||| ||| | | ||||||||| |||||| ||||| ||| Sbjct 158122 GATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTTGA-CGT 158064 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| || || || || | |||||||| ||||| |||| ||| || | Sbjct 158063 TGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAACGTCTTGA 158004 Query 46581 CAAAGATTTGCAT 46593 | || || ||||| Sbjct 158003 CGAAAATCTGCAT 157991 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| ||||| | || || |||| || |||||||||||||| || Sbjct 157900 CTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 157841 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | || | | |||||||||| ||||| ||||| ||| Sbjct 157840 GATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTTTGCCTTGA-CGT 157782 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| ||| || || || | ||||| || ||||| |||| ||| || | Sbjct 157781 TGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACGTCTTCA 157722 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 157721 CGAAGATTTGCAT 157709 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct 157444 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 157385 Query 46462 TATCAAGCGCTGCTGGTCGG 46481 |||| ||| |||||||||| Sbjct 157384 GATCAGGCGTTGCTGGTCGG 157365 >seq145 Length=336 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || || || |||| || ||||||||||| ||||| Sbjct 89 CTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 148 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| ||| | || |||||||||| ||||||| ||||| | Sbjct 149 GATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATT 208 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || || | ||||| || || ||||||| || || || Sbjct 209 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAGGTCTTGAC 268 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 269 GAAGATCTGCAT 280 >seq905 Length=41247 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||| || ||||| |||| || Sbjct 19022 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 18963 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||||||||||| ||||| |||| ||||||||| || Sbjct 18962 GAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATC 18927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565200804580920