Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3662 315 7e-81 seq4520 129 6e-25 seq633 123 2e-23 seq145 123 2e-23 seq905 91.5 1e-13 >seq3662 Length=107388 Score = 315 bits (348), Expect = 7e-81 Identities = 409/562 (73%), Gaps = 9/562 (2%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| | ||| || |||||| |||| |||||| || | || ||||| |||||| Sbjct 78167 TGAACAGGAGGCAGGCGAAGTCGGTGTGCATGCCCTCATCACGAGATATGAGCTCGTTGG 78108 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| |||| ||||||||| | ||| || || || | ||| || || | |||||| || Sbjct 78107 AGAAGGTCAGGCCGGGCATCAAGCCACGCTTCTTCAACCAGAAGATAGAGGCGAAGGAGC 78048 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||||| ||||||||||| ||||| || || || ||||| | |||| | | Sbjct 78047 CAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTCAGCAAACGCAGACT 77988 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | ||| || ||||||| | || ||||| || ||||| | |||| || || || || | Sbjct 77987 CCTTGTCGGAGATCCAGTGAAGAGCCCAGTCCGCCTTCTTCTTGATACAGGGAATGGTAT 77928 Query 133124 CGATGGCGTTCAACAAACGGAG-TTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGA 133180 ||||||||| || | || | | | || |||||| | | ||| |||||||||| Sbjct 77927 CGATGGCGTCGAAGA---GGTGCTCGCGCTGGCGAGGATCCTTGATGTATGTGTCGATGA 77871 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 | ||||| | || ||||| | ||||||||| ||| || |||||||| ||||| | Sbjct 77870 GAAGGGAATAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAAC 77811 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | |||||| || |||| || || | | ||| |||||||| || || ||||||||||| | Sbjct 77810 GAGCCTCGGCCGCCTGGACCTCATTCGAGAACCGCTCGACGAGGTTCTCGTTGACGATAC 77751 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 | ||| || || || || || || |||||| |||||| || || |||| |||||||| Sbjct 77750 CATCGGACGCAGCAAAGAACGCGAGAACGTGCGAGATGAAGTGACGTTCGTCGTCGTTCA 77691 Query 133361 AGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417 ||| | ||||||| | ||||||||||||||||| |||||| | ||||| || | Sbjct 77690 GGCGGTTGTTCCAGTCGTGGAGGTCCTTGGACAGGTCCATCTCCTCAGCCGTCCAGAAGG 77631 Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || |||||||| Sbjct 77630 ACGCCTCAGCCTTCTTGTACAT 77609 Score = 282 bits (312), Expect = 4e-71 Identities = 396/552 (72%), Gaps = 9/552 (2%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| ||||||||| |||| |||||||| | || || ||||| ||| || || | Sbjct 75614 GCATGCAAAGTCGGTGTGCATACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAG 75673 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 ||||||||| | ||| || || |||||||| |||||||||||||| || |||||||| Sbjct 75674 GCCGGGCATCAAGCCACGCTTCTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAGAA 75733 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || |||||| || || ||||| || || || ||||| ||||| || || | || Sbjct 75734 GATGCCCTCCACAGCGGCGAACGCTACAAGACGCTCTGCGAACACGGAGCGTTCGTCCGC 75793 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 ||||||||| || ||||| || ||||| | |||| |||||||| || |||||||||| Sbjct 75794 GATCCAGCGGAGGGCCCAGTCCGCCTTCTTCTTGATGCACGGCACGGTGTCGATGGCGTC 75853 Query 133134 CAACA--AACG-GAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATA 133190 || | |||| | | ||| | | | ||| |||||||||||| || || Sbjct 75854 GAAGAGGAACGCGCG---CTCAGTGGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTA 75910 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | | ||||| || |||||||| || ||| || |||||||| ||||| || ||||| | Sbjct 75911 CGTCTCCGAATGCACGTTCTCGATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCTGC 75970 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | || || || | || ||| ||||| || || || ||||| ||||||||||| ||| Sbjct 75971 GGCTTGGACCTCGTTAGAGAACCGCTCAACGAGGTTCTCGTTCACGATGCCGTCTGAGGC 76030 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTC 133367 |||||| ||||| ||||||| |||||| || || |||||| | || || ||| || Sbjct 76031 GGCGAAGAAGGCTAGCACGTAGGAGATGAAGTGCCGTTCGTTGGCATTTAACTTGCGGTC 76090 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 |||||| ||| | || ||||| | ||| || || ||||| || ||||| | || Sbjct 76091 CCAGTCCATGAGGTCGTGCGAGAGGTCTATCTCTTCTACCGTCCAGAAGGACGCTTGAGC 76150 Query 133428 TTTTTTGTACAT 133439 ||||||||||| Sbjct 76151 ATTTTTGTACAT 76162 >seq4520 Length=427429 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||||||||| || ||||| |||| |||||| | | Sbjct 157481 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCTTCA 157540 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || || ||||||| Sbjct 157541 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 157600 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || ||||| ||||| || || | || |||||| |||||||||| Sbjct 157601 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 157660 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| |||| || ||| | || |||||| Sbjct 157661 ATCCAAAAGGAGTCGACTCTTCATCTTGTCCTGCGT 157696 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || ||||| ||||||||| |||| || ||| | || Sbjct 157991 ATGCAGATTTTCGTCAAGACGTTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 158050 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||| |||| ||||| ||||| || || ||||||| Sbjct 158051 GACACGATCGACAACG-TCAAGGCAAAGATCCAAGACAAGGAGGGTATCCCGCCCGACCA 158109 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| ||||| ||| |||| || | ||||| || || ||||| Sbjct 158110 ACAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTTTCGGATTACAA 158169 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||||||||| |||| || || Sbjct 158170 CATCCAAAAGGAGTCGACTCTTCA 158193 Score = 111 bits (122), Expect = 2e-19 Identities = 154/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| || || || ||||| | || || ||| || | Sbjct 158219 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAGACGATCACGCTAGAGGTTGAGTCCTCA 158278 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || || ||||| |||||| | || || Sbjct 158279 GACACGATCGACAACG-TGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCA 158337 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||||| || | ||| || || ||| |||| |||| ||||| ||| |||||||| Sbjct 158338 GCAGCGGCTTATCTTCGCTGGAAAGCAGTTGGAGGACGGTCGCACGCTCTCTGACTACAA 158397 Query 38423 CATCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 |||||| ||||| | ||||| || |||||| Sbjct 158398 CATCCAGAAGGAGTCTACGCTCCACCTTGGTG 158429 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 ||||| ||||||| || || || || | ||||||||| ||||| || |||| ||||| Sbjct 157358 ATTCCTCCCGACCAGCAACGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACA 157417 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||| ||||||||||||||| ||||| |||| || || Sbjct 157418 CTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 157455 >seq633 Length=42484 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||||||||| || ||||| | || || ||| || | Sbjct 34752 ATGCAGATCTTCGTCAAGACGCTCACGGGCAAGACGATCACGTTGGAGGTTGAGTCCTCG 34693 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 34692 GACACGATTGATAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCA 34634 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||||||||| | ||| ||||| ||||| || |||| ||||| || |||||||| Sbjct 34633 GCAGCGGCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTGTCGGACTACAA 34574 Query 38423 CATCCAAAAGGA 38434 |||||| ||||| Sbjct 34573 CATCCAGAAGGA 34562 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| |||||||| |||| |||||| | || Sbjct 35088 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 35029 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 35028 GACACTATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 34970 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | |||||||| ||| |||| || | ||||||||| ||| ||||| Sbjct 34969 GCAGCGCCTGATCTTTGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTCTCCGATTACAA 34910 Query 38423 CATCCAAAAGGA 38434 |||||| ||||| Sbjct 34909 CATCCAGAAGGA 34898 >seq145 Length=336 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| || || ||||| |||| |||||| | | Sbjct 280 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACGATCACTCTCGAGGTCGAGTCGTCG 221 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| ||||||| Sbjct 220 GACACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCAG 161 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || |||| || |||||| || |||||| Sbjct 160 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTCTCGGATTACAAC 101 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| |||||||||| | || || ||| | | |||||| Sbjct 100 ATCCAGAAGGAGTCGACGCTGCACCTTGTCCTCCGTCTCCGCGGCGGC 53 >seq905 Length=41247 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| | || || ||||| || || | ||||||||| ||||| || |||| |||||| Sbjct 18918 ATCCCCCCTGATCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACC 18977 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| ||||||||||||||| ||||| | || || || ||||||| || Sbjct 18978 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 19027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500139532256640