Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3662 116 4e-21 >seq3662 Length=107388 Score = 116 bits (128), Expect = 4e-21 Identities = 173/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | |||||| ||||| || || |||||||| || ||| ||||| Sbjct 75618 GCAAAGTCGGTGTGCATACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAGGCCG 75677 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | || |||||||| | ||| | || ||| ||| |||||||| |||||||| Sbjct 75678 GGCATCAAGCCACGCTTCTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAGAAGATG 75737 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA---GGAGCGAGACTTTGTGT-C 117449 ||||||||| || ||||| | ||| ||||| ||||| |||||| || || | Sbjct 75738 CCCTCCACAGCGGCGAACGCTACAAGACGCTCTGCGAACACGGAGCG----TTCGTCCGC 75793 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509 | ||| | ||||| | ||||||||||| || || || || || | |||||| || Sbjct 75794 GATCCAGCGGAGGGCCCAGTCCGCCTTCTTCTTGATGCACGGCACGGTGTCGATGGCGTC 75853 Query 117510 AAA 117512 || Sbjct 75854 GAA 75856 Score = 111 bits (122), Expect = 2e-19 Identities = 333/505 (66%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| || || || || || || |||||| ||||| ||||| | || |||||| Sbjct 78135 CCCTCATCACGAGATATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAAGCCACGCTTC 78076 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 |||||||| | |||| | ||| || || ||||||||||||||||| || || || Sbjct 78075 TTCAACCAGAAGATAGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAG 78016 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACT--TTGT-GTCAAACCATTTCATTGCCCAT 117468 |||| || ||||| || || | ||||| |||| | | ||| | | ||||| Sbjct 78015 GCAACGAGACGCTCAGCAAACG---CAGACTCCTTGTCGGAGATCCAGTGAAGAGCCCAG 77959 Query 117469 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCT-TCTTTTC 117527 | ||||||||||| ||||| || | || | |||||| || || | |||| | | Sbjct 77958 TCCGCCTTCTTCTTGATACAGGGAATGGTATCGATGGCGTCGAAGAGGTGCTCGCGCTGG 77899 Query 117528 AGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT-TT 117586 || |||||| |||||| |||| || | ||||| || ||| || | | | Sbjct 77898 CGA-GGATCCTTGATGTATGTGTCGATGAGAAGGGAATAAGTCTCGGAGTGGATGTTCTC 77840 Query 117587 CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCGCAA 117646 ||| ||| | || | ||||||| | || || ||| ||| || |||| || | Sbjct 77839 CATCATGATCTGGA-AGCCGTAGAAGCAACGAGCCTCGGCCGCCTGGACCTCATTCGAGA 77781 Query 117647 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGT 117706 | | || ||||| || || ||||||||| |||||||||| || || | || Sbjct 77780 ACCGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCAAAGAACGCGAGAACGT 77721 Query 117707 ACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCTTTGG 117763 | ||||| | ||| | || |||| || | |||||||||| || || |||| Sbjct 77720 GCGAGATGAAGTGACGTTCGTCGTCGTTCAGGCGGTTGTTCCAGTCGTGGAGGTCCTTGG 77661 Query 117764 ACAAATCAACTTCTTCCGCAGTCCA 117788 ||| || | || || || ||||| Sbjct 77660 ACAGGTCCATCTCCTCAGCCGTCCA 77636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589941558902040