Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4520 161 2e-34 >seq4520 Length=427429 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| ||||| || |||||||| | |||||| | ||||| || Sbjct 158199 ACGAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCC 158140 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || ||||||||||| || |||||||| || || || || || |||||||| Sbjct 158139 AACTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGG 158080 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||||||||| || || ||||| ||| || || || ||||| | ||||| Sbjct 158079 ATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 158020 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 158019 CCAGTCAACGTCTTGACGAAAATCTGCAT 157991 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| |||||||| ||||| ||||| || ||||| |||| || || | ||||| ||| Sbjct 157689 ACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCG 157630 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || ||||| ||||| ||||| ||||| || ||||| || Sbjct 157629 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 157570 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| ||| || || || || || | |||||| Sbjct 157569 ATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATCGTCTTG 157510 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 157509 CCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 105 bits (116), Expect = 1e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| || || ||||| || || || ||||| || | || || | || || || | Sbjct 158426 CAAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCCA 158367 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| || ||||||||||| || || || || || |||||||| || || || || | Sbjct 158366 ACTGCTTTCCAGCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGA 158307 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| || || ||||| || || || || || || | |||||| | Sbjct 158306 TCTTCGCCTTCACGTTGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTCTTCC 158247 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| | || || ||||| | ||||| Sbjct 158246 CTGTGAGCGTCTTGACGAAAATCTGCAT 158219 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| || || | || || ||| Sbjct 157461 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCCTCG 157402 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || |||||||| || ||||| ||||| |||||||||| Sbjct 157401 AGCTGCTTGCCCGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATGC 157356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109405960745207