Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq4520 109 4e-19 seq145 91.5 1e-13 >seq4520 Length=427429 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || || |||||||||| | || | | | || || | ||| Sbjct 157911 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGC 157852 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| ||||| ||||| || || || ||||| || || || || ||||| ||| Sbjct 157851 TTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTTT 157792 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | || || |||| || || ||||| |||| ||| |||||||| Sbjct 157791 GCCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTC 157732 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || || || || ||||| Sbjct 157731 AACGTCTTCACGAAGATTTGCAT 157709 >seq145 Length=336 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || || || || |||||||| | || || | | | || || | ||| Sbjct 78 TGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCGTCCTCAAGCTGC 137 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| || |||||||||||||| || || || || || || Sbjct 138 TTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTC 197 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| |||| || || || ||||||| ||| || || || Sbjct 198 GCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTCCCCGTC 257 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || || || |||||||| Sbjct 258 AAGGTCTTGACGAAGATCTGCAT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396252701469597