Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq633 107 1e-18 seq4520 102 6e-17 seq145 87.8 1e-12 >seq633 Length=42484 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || |||||||| || || || |||||||| || || | || | || |||||||| Sbjct 34885 ATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCAACTG 34944 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| ||||| ||||| || |||| |||| ||||||||||| ||||| Sbjct 34945 CTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTT 35004 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | || || |||| ||| ||||| | || || || || || || Sbjct 35005 CGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 35064 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || ||||| |||||||| Sbjct 35065 CAAGGTCTTGACAAAGATCTGCAT 35088 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || || | || |||| || | |||| Sbjct 34550 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTGC 34609 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || || || ||||| || || | || | ||||||||||| ||||| Sbjct 34610 TTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTC 34669 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | | || || | ||| ||||||| ||| ||||| || ||||| Sbjct 34670 GCCTTCACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTGCCCGTG 34729 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || |||||||| Sbjct 34730 AGCGTCTTGACGAAGATCTGCAT 34752 >seq4520 Length=427429 Score = 102 bits (112), Expect = 6e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 48557 CACCAAA-TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGT 48615 |||||| || ||||| ||| || || || ||||| ||||| || | ||| |||| | Sbjct 158429 CACCAAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCT 158370 Query 48616 CCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGC 48675 |||||||||| || || || || || ||||| ||||||| ||||| ||||||||| || Sbjct 158369 CCAACTGCTTTCCAGCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCT 158310 Query 48676 TAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTT 48735 ||||| || || | | | ||||| | ||| ||||| | ||| ||||| | Sbjct 158309 GGATCTTCGCCTTCACGTTGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTCT 158250 Query 48736 TTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || || | || || || ||||||||||| Sbjct 158249 TCCCTGTGAGCGTCTTGACGAAAATCTGCAT 158219 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| |||||||| || | | || |||| || | |||||| |||||||| Sbjct 157900 CTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 157841 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| ||||| || |||| ||||| ||||||||||| ||||||| || || Sbjct 157840 GATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTTTGCCTTGACGTT 157781 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || |||| ||| ||||| | || ||||| || || ||||| || || || Sbjct 157780 GTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACGTCTTCAC 157721 Query 48755 AAAAATCTGCAT 48766 || || ||||| Sbjct 157720 GAAGATTTGCAT 157709 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || |||||||| || ||| | ||| | || ||||||||||| ||||| || Sbjct 158182 CTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAA 158123 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || |||||||| || | || | ||||||||||| |||||| || || Sbjct 158122 GATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTT 158063 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||| ||||| | || || || || || ||||| || || || Sbjct 158062 GTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAACGTCTTGAC 158003 Query 48755 AAAAATCTGCAT 48766 ||||||||||| Sbjct 158002 GAAAATCTGCAT 157991 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || | ||| || || ||| ||||| || ||||| || || || | || Sbjct 157698 AGACGCAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGG 157639 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| |||||||| || || || || || || | || | ||||||| Sbjct 157638 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCC 157579 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| | ||| ||||| | ||| Sbjct 157578 TTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTG 157519 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || ||||| | || || ||||| |||||||| Sbjct 157518 ATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 >seq145 Length=336 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || |||||||| || || | || |||| || | |||| Sbjct 78 TGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCGTCCTCAAGCTGC 137 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || || || ||||| || || | |||| |||||||||||| ||||| Sbjct 138 TTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTC 197 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || |||| ||| ||||| | || ||||| || |||||| Sbjct 198 GCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTCCCCGTC 257 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || || || |||||||| Sbjct 258 AAGGTCTTGACGAAGATCTGCAT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380912896315683