Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3662 192 1e-43 seq4755 122 2e-22 >seq3662 Length=107388 Score = 192 bits (212), Expect = 1e-43 Identities = 390/570 (68%), Gaps = 17/570 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| |||||||||| || |||||| || |||||| | |||||||| || || Sbjct 76171 ATATGGCAGATGTACAAAAATGCTCAAGCGTCCTTCTGGACGGTAGAAGAGATAGACCTC 76112 Query 25537 GCCAAGGAC---ATGGAC--GGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | | ||| |||||| || | | | | || | || ||| | ||| || || Sbjct 76111 TCGCACGACCTCATGGACTGGGACCGCAAGTTAAATGCCAA--CGAACGGCACTTCATCT 76054 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 |||||| | || ||||| || ||||| || || || ||||||||||| || ||| Sbjct 76053 CCTACGTGCTAGCCTTCTTCGCCGCCTCAGACGGCATCGTGAACGAGAACCTCGTTGAGC 75994 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| | | || || || || |||||| || |||||||| |||||||| | Sbjct 75993 GGTTCTCTAACGAGGTCCAAGCCGCAGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 75934 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 |||| || ||||| || ||| ||| || || || || |||||||| | |||| Sbjct 75933 TCGAGAACGTGCATTCGGAGACGTACTCC---CTCCTCATCGACACGTACATCAAAGACC 75877 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 | | ||| | | || || | |||||||| | | || ||||||||| ||||| Sbjct 75876 CCACTGAGCGCGCGTTCCTCTTCGACGCCATCGACACCGTGCCGTGCATCAAGAAGAAGG 75817 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGT-TTGGC-GAGCGGCTGGT 25886 || |||||| | |||||| | | | || |||| ||| || || ||||| || || Sbjct 75816 CGGACTGGGCCCTCCGCTGGATCG-CGGAC-GAACGCTCCGTGTTCGCAGAGCGTCTTGT 75759 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 ||| || || ||||||||||||||||| || ||| ||||| || ||||| |||||||| Sbjct 75758 AGCGTTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTCTGGCT 75699 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || || |||||||| || ||||||||| || || ||| | ||||| Sbjct 75698 CAAGAAGCGTGGCTTGATGCCCGGCCTCACCTTTTCCAATGAACTGATCTCACGAGACGA 75639 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 |||| | |||| || ||||| ||||| || Sbjct 75638 GGGTATGCACACCGACTTTGCATGCCTCCT 75609 Score = 187 bits (206), Expect = 5e-42 Identities = 439/655 (67%), Gaps = 22/655 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| ||||||||||||||||| | || |||||| || || ||||| || ||| Sbjct 77600 ATTTGGCAGATGTACAAGAAGGCTGAGGCGTCCTTCTGGACGGCTGAGGAGATGGACCTG 77659 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 |||||||| | ||| |||| || || || | | ||||| | || || || Sbjct 77660 TCCAAGGACCTCCACGACTGGAACAACCGC-CTGAACGACGACGAACGTCACTTCATCTC 77718 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | |||| | || |||||||| || || |||||||| || |||||||| || |||| | Sbjct 77719 GCACGTTCTCGCGTTCTTTGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTCGAGCG 77778 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| | | || || ||| | ||||| || |||||||| |||||||| || Sbjct 77779 GTTCTCGAATGAGGTCCAGGCGGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGAT 77838 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA-CG 25768 || || | ||||| ||| ||| || ||||| || || ||||| | || | Sbjct 77839 GGAGAACATCCACTCCGAGACTTATTCC---CTTCTCATCGACACATACATCAAGGATCC 77895 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 ||||| || | || | || || | |||||||| ||| ||| | ||||||| ||||| Sbjct 77896 TCGCC-AGCGCGAGCACCTCTTCGACGCCATCGATACCATTCCCTGTATCAAGAAGAAGG 77954 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 || ||||| | | |||||| | | || || |||||| ||||| || || | Sbjct 77955 CGGACTGGGCTCTTCACTGGATCTCCGACAAGGAGTCTGCGTTTGCTGAGCGTCTCGTTG 78014 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 |||| ||||| || ||||| ||||| ||| || || || || | ||||||||| | | Sbjct 78015 CCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCTATCTTCTGGTTGA 78074 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || |||||||| ||| ||| |||||||||||||| | || |||| Sbjct 78075 AGAAGCGTGGCTTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATATCTCGTGATGAGG 78134 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 | | |||| || || |||||||| || | || ||||| || | | | ||| Sbjct 78135 GCATGCACACCGACTTCGCCTGCCTCCTGTTCA---GCCAC---CTGAAGAGGCGCCCTC 78188 Query 26069 A---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | || | ||| | ||||||| |||||| || ||||| ||| ||||||| Sbjct 78189 ACCCGGACATTGTCCGCCAGATCATCACAGAGGCGGTAGAGATTGAGCAGGAGTT 78243 >seq4755 Length=85889 Score = 122 bits (134), Expect = 2e-22 Identities = 169/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGA 221478 ||| |||||||||||||||||||||||| | ||| || |||| ||||| || || Sbjct 30776 GGCGGCGTGGTAGATGGTCTCAAAGATCTGCAGGTTCAG---CTTGCGCGCCTCAGGGGA 30832 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||||||||| || || | ||| |||||||||| ||||| || ||||||||||| Sbjct 30833 GTCGAAGGGCATGCGGAGGGCCATGAAGGCGTCGGCCAGACCCTGCACACCGATACCGAT 30892 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 ||| | ||| | | |||| ||| || | ||| || || | ||||| |||||||||||| Sbjct 30893 GGGACGGTGGCGCATGTTTGAA-CGCCTCGCCTCGGGGATCGGATAGTAGTTGACGTCGA 30951 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGG 221650 | | ||| ||||| | | || || || ||| ||| |||||||||| Sbjct 30952 TGATGCGGTTCAGGTTGAACGCGACCACCTTCGTCACGTCGTGCAGCTTCTGG 31004 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 222044 AAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCG 222103 || || || || ||||| ||||| | || ||||| | || || ||||||| ||| Sbjct 31481 AAAAGATCGGGTATCCAAAGCGCATAGAATAGATCGCGGGCGCGAACCTCCTCCTTTCCG 31540 Query 222104 TTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACG 222163 | ||| || | || || | ||||| || | ||| |||||||||||||| || |||| | Sbjct 31541 TGGTTCTTGCGAAGGTCAATGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATG 31600 Query 222164 GCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 || | ||||||||| |||||||||||||||||||| || Sbjct 31601 GCGAAAGCGCCGGGACGCTTGTTGCCACCCTGATCGAC 31638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928783020210240