Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3662 116 4e-21 >seq3662 Length=107388 Score = 116 bits (128), Expect = 4e-21 Identities = 173/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || || |||||| | || || || || || ||||||||||| | ||||| | ||| Sbjct 75856 TTCGACGCCATCGACACCGTGCCGTGCATCAAGAAGAAGGCGGACTGGGCCCTCCGCTGG 75797 Query 65050 TTTG-ACACAAAGTCTCGCTCC---TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGA 65105 | | || || |||||| ||||| ||||| ||| | ||||| || |||||| Sbjct 75796 ATCGCGGACGAA----CGCTCCGTGTTCGCAGAGCGTCTTGTAGCGTTCGCCGCTGTGGA 75741 Query 65106 GGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCAT 65165 ||| |||||||| |||||||| ||| ||| || | ||| | |||||||| || | || Sbjct 75740 GGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTCTGGCTCAAGAAGCGTGGCTTGAT 75681 Query 65166 GCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT 65225 ||| ||||| ||| || |||||||| || || ||||| |||||| | ||| || || Sbjct 75680 GCCCGGCCTCACCTTTTCCAATGAACTGATCTCACGAGACGAGGGTATGCACACCGACTT 75621 Query 65226 TGC 65228 ||| Sbjct 75620 TGC 75618 Score = 111 bits (122), Expect = 2e-19 Identities = 333/505 (66%), Gaps = 13/505 (3%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || || || | || ||||||| || || |||||||||| | || |||| Sbjct 77636 TGGACGGCTGAGGAGATGGACCTGTCCAAGGACCTCCACGACTGGAACAACCGCCTGAAC 77695 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || | ||| | ||||| | || | || || |||||||||| ||||||||| || Sbjct 77696 GACGACGAACGTCACTTCATCTCGCACGTTCTCGCGTTCTTTGCTGCGTCCGATGGTATC 77755 Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890 || ||||| || | || || |||| || ||| ||| || || | Sbjct 77756 GTCAACGAGAACCTCGTCGAGCGGTTCTCGAATGAGGTCCAGGCGGCCGAGGCTCGTTGC 77815 Query 64891 TTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGAT 64949 ||||||| | || | ||| ||| | | | || ||| || ||||| | || Sbjct 77816 TTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACTTATTCCCTTCTCAT 77874 Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGA-AGCAGTTATTTGAAGCCATCCAAACTG 65008 |||| |||||| |||||| || | | |||| | || || |||||| | || Sbjct 77875 CGACACATACATCAAGGATCC-TCGCCAGCGCGAGCACCTCTTCGACGCCATCGATACCA 77933 Query 65009 TACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AGTCTC 65065 | || ||||| ||||||||||| | ||||| | | ||| | | |||| ||||| Sbjct 77934 TTCCCTGTATCAAGAAGAAGGCGGACTGGGCTCTTCACTGGATCTCCGACAAGGAGTCTG 77993 Query 65066 GCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGT 65125 | || || ||||| || |||| || || || ||||||||||||||||| || | Sbjct 77994 ---CGTTTGCTGAGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCT 78050 Query 65126 CATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185 | ||| | |||| | |||||||||||||| || | ||||| ||||| |||||| | Sbjct 78051 CCTTCGCCTCTATCTTCTGGTTGAAGAAGCGTGGCTTGATGCCCGGCCTGACCTTCTCCA 78110 Query 65186 ATGAACTTATTTCCCGAGATGAGGG 65210 | || || || || || |||||||| Sbjct 78111 ACGAGCTCATATCTCGTGATGAGGG 78135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596529920664480