Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq4520 199 5e-46 seq633 188 9e-43 seq5091 185 1e-41 seq2479 140 4e-28 seq4242 122 1e-22 seq2370 98.7 1e-15 seq905 98.7 1e-15 >seq4520 Length=427429 Score = 199 bits (220), Expect = 5e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || ||||| || || || || ||||| |||||||| ||||| | Sbjct 157479 GTATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCTT 157538 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 ||||||| ||||| || | || || ||||| || || ||||| ||||| || ||||| | Sbjct 157539 CAGACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACC 157598 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||||| || || ||||| || || ||||| || ||||| ||||||||| | || |||| Sbjct 157599 AGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACA 157658 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | ||||||||||| ||||| || ||||| || | || || |||||| Sbjct 157659 ACATCCAAAAGGAGTCGACTCTTCATCTTGTCCTGCGTCTCCGTGGTGGT 157708 Score = 172 bits (190), Expect = 7e-38 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || || || || || || || ||||| || ||||||||||| ||| Sbjct 158219 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAGACGATCACGCTAGAGGTTGAGTCCTCA 158278 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || ||||| || |||||||| |||||||| || |||||| Sbjct 158279 GACACGATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAG 158338 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || ||||| || ||| | || || || || || ||| |||| |||||| Sbjct 158339 CAGCGGCTTATCTTCGCTGGAAAGCAGTTGGAGGACGGTCGCACGCTCTCTGACTACAAC 158398 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 | || ||||||||||| || ||||||| Sbjct 158399 ATCCAGAAGGAGTCTACGCTCCACCTTG 158426 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || || | ||||| || || |||||||||||||||||||| || Sbjct 157991 ATGCAGATTTTCGTCAAGACGTTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 158050 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| || ||||| ||||| ||||| || || || ||||| || Sbjct 158051 GACACGATCGACAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATCCCGCCCGACCAA 158110 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || || || || ||| | || ||||| || || || | ||||||||| Sbjct 158111 CAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTTTCGGATTACAAC 158170 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||||||||||| ||||| ||||| || || | || || ||||| Sbjct 158171 ATCCAAAAGGAGTCGACTCTTCACCTCGTCCTCCGCCTGCGCGGTGG 158217 Score = 168 bits (186), Expect = 9e-37 Identities = 164/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| ||||| || | || || || || |||||||| ||||| |||| Sbjct 157704 GTGGTATGCAAATCTTCGTGAAGACGTTGACCGGCAAGACGATCACCCTTGAGGTCGAGT 157763 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| || || ||||| ||| |||| || |||||||| || ||||| || ||||| || | Sbjct 157764 CGTCCGATACCATCGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGGATTCCCCCGG 157823 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || ||||| || || |||||||| || || || || | | |||| Sbjct 157824 ACCAGCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACGTTGTCCGATT 157883 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCT 172067 ||||| |||| ||||||||||| || ||||| Sbjct 157884 ACAACATTCAGAAGGAGTCTACCCTTCACCT 157914 >seq633 Length=42484 Score = 188 bits (208), Expect = 9e-43 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| ||||| ||||| ||||| || || || || ||||| |||||||| ||||| Sbjct 35371 AGCATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCC 35312 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 || || || ||||| ||| |||| |||||||| || || ||||||||||| || ||||| Sbjct 35311 TCGGATACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGAC 35252 Query 171979 CAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTAC 172038 ||||| || || || || || || || |||||||| || || || |||||| | |||||| Sbjct 35251 CAGCAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTAC 35192 Query 172039 AACGTTCAAAAGGAGTCTACTCTACACCT 172067 ||| |||| ||||||||||| || ||||| Sbjct 35191 AACATTCAGAAGGAGTCTACCCTGCACCT 35163 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || || || || ||||| | ||||||||||| || Sbjct 34752 ATGCAGATCTTCGTCAAGACGCTCACGGGCAAGACGATCACGTTGGAGGTTGAGTCCTCG 34693 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || |||||| | || || ||||| || || ||||| || || || || || ||| Sbjct 34692 GACACGATTGATAACGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 34633 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || |||||||| || || || || || | || |||||| Sbjct 34632 CAGCGGCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTGTCGGACTACAAC 34573 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||| || || ||||| || || | || || ||||| Sbjct 34572 ATCCAGAAGGAGAGCACCCTTCACCTCGTCCTTCGCCTCCGTGGTGG 34526 >seq5091 Length=195002 Score = 185 bits (204), Expect = 1e-41 Identities = 255/357 (71%), Gaps = 0/357 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || || || || || || ||||| | | ||||||||||||| |||||| || | | | Sbjct 106134 CCTGAGGAGATCTCCTCCATGGTCCTCACGAAGATGAAGGAGATTGCGGAGTCCTACCTC 106193 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || || || | || || || || || || || ||||||| || || ||||| Sbjct 106194 GGCGGCACCGTCACCTCCGCGGTCGTCACCGTTCCCGCATACTTCAACGACTCGCAACGT 106253 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 |||||||| |||||||| | | | || || ||||| ||| || | || ||||| || Sbjct 106254 CAGGCGACCAAGGACGCGGGTACCATCGCTGGTCTCAACGTCCTCCGTATCATCAACGAG 106313 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || || || || ||||| |||||||| | | | || || || Sbjct 106314 CCCACGGCCGCCGCCATCGCCTACGGTCTCGACAAGAAGACCCAGGGCGAGCGCAACGTC 106373 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| ||||||||||| ||||| || |||||||| || || | ||||| | ||| Sbjct 106374 CTCATCTTCGATCTCGGTGGAGGTACCTTCGATGTCTCCCTCCTGACGATTGAGGAGGGT 106433 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || ||||| || ||||| || |||||||||||||| || |||||||| || |||||| Sbjct 106434 ATCTTCGAGGTCAAGGCCACCGCTGGTGATACTCACCTCGGTGGTGAGGACTTCGAT 106490 Score = 111 bits (122), Expect = 2e-19 Identities = 241/358 (67%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| || || || || ||| | | | |||||||||||||| || || |||| | Sbjct 193827 CCCGAGGAGATATCCTCCATGATTCTCACGAAGATGAAGGAGACCGCCGAGTCTTATCTA 193768 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | ||||||| || || | || || || || ||||||| | | || || Sbjct 193767 GGCAGCACTGTGACCTCGGCGGTGATCACCGTCCCCGCCTACTTCAATAACGTGCAGCGT 193708 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 | ||| || ||||| || | | |||| || ||||| || ||| | |||||| || Sbjct 193707 CGGGCCACCAAGGATGCGGGTACTATCGCAGGTCTCAATGTTCTCCGTGTTATCAGCGAG 193648 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || | || ||||| ||| |||| ||||| || | ||||| ||| || || Sbjct 193647 CCCACCGCCGTCGCCATTGCCTATAGTCTCGACAAAAAGACTGACGACGATCGCAACGTT 193588 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAAT-ATTGAAGGTGG 195930 | ||| | ||| | ||||| || | ||||||| ||| || | | |||||| | Sbjct 193587 CTCATCCTCGATATTGGTGGAGGGGCTACCAATGTCTCTCTT-TCGGTGACTGAAGGGAG 193529 Query 195931 TATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||| | ||||| ||||| ||| ||||| ||||| || |||||||| || ||| || Sbjct 193528 TATCCTTGAAGTGAAGGCGTATGCCGGTGACACTCACCTTGGTGGTGAGGACTTCAAT 193471 >seq2479 Length=51413 Score = 140 bits (154), Expect = 4e-28 Identities = 193/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| ||| || ||||| | ||||| ||||| |||| | | || || Sbjct 22955 GTCCCTGCCTACTTCAATGACTCCCAACGTCTCGCGACCAAGGATGCTGGTTCCATCGCT 23014 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || | ||| | || ||||| || || || ||||| || ||||| || ||||| Sbjct 23015 GGCCTCGAGGTTCTCCGTATCATCAACGAGCCCACCGCGGCCGCCATTGCCTACGGTCTC 23074 Query 195842 GACAAGAA--CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 ||| | |||| || ||| | || || | ||||| ||||| ||||| || |||| Sbjct 23075 GACCGCCAGTCAAGTGCGGAGA--AGAACGTCCTCATCTTCGATCTTGGTGGAGGAACGT 23132 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| || ||||| || |||||| | |||| || ||||| |||||||||| Sbjct 23133 TCGATGTCTCCCTCCTCAACATCACTGGTGGTGTTTTCGCCGTCAAGGCCACTGCTGGTG 23192 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || | |||||||| || ||||| Sbjct 23193 ACACCCACTTGGGTGGTGAGGACTTCGA 23220 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 195383 GGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGAT 195442 || |||||||| ||||| || ||||||||||| | | | | || ||||| |||| ||| Sbjct 22506 GGCAACCGTACCACTCCCTCCTACGTTGCCTTCTCCGCTGAGGAGCGTCTGATTGGTGAT 22565 Query 195443 GCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTT 195502 ||||| || || ||| | || |||||||| | || || || || || || |||||||| Sbjct 22566 GCCGCGAAGAACCAGGCTGCGATGAACCCCAAGAACACCGTGTTCGATGCTAAGCGTCTC 22625 Query 195503 ATTGGTCG 195510 || || || Sbjct 22626 ATCGGCCG 22633 >seq4242 Length=23589 Score = 122 bits (134), Expect = 1e-22 Identities = 243/356 (68%), Gaps = 3/356 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| || || || | ||||| || |||||||||||||| || || | | | | Sbjct 10608 CCCGAGGAGATCTCCGCCATGGTTCTGGGCAAGATGAAGGAGACCGCTGAGGCGTACCTC 10549 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | || | | || || || || || || || ||||||| || | || || Sbjct 10548 GGCCGCTCGGTCACTCACGCCGTCGTCACCGTCCCCGCCTACTTCAACGACGCTCAGCGT 10489 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 |||||||| ||||| || | | | || || ||||| | ||| | || ||||| || Sbjct 10488 CAGGCGACCAAGGATGCCGGTACCATCGCTGGTCTTCAGGTTCTCCGTATCATCAACGAG 10429 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || || || || ||||| |||||||| | ||| | |||| | Sbjct 10428 CCTACCGCTGCCGCGATCGCCTACGGTCTCGACAAGAAGGGCGGCGA-GTCGCAAATC-A 10371 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 ||| | | ||||||||||| || || || ||||| || || ||| || || | ||| Sbjct 10370 TTG-TGTACGATCTCGGTGGAGGAACCTTCGATGTGTCCCTCCTCTCCATCGACGACGGT 10312 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||||| || ||||||||| |||||||| || || |||||||| || ||||| Sbjct 10311 GTATTCGAGGTCTTGGCTACTGCCGGTGATACCCACCTTGGTGGTGAGGACTTCGA 10256 >seq2370 Length=61181 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || ||||||||||| ||||| ||||| || Sbjct 54427 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCC 54486 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| |||| |||||||| || || ||||| || Sbjct 54487 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 54530 >seq905 Length=41247 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||||||||||||||| || Sbjct 18756 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 18815 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || |||| |||||||| ||||| ||||| || Sbjct 18816 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGG 18859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657818643927120