Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3662 120 9e-22 seq2326 98.7 3e-15 seq125 86.0 2e-11 >seq3662 Length=107388 Score = 120 bits (132), Expect = 9e-22 Identities = 247/362 (68%), Gaps = 14/362 (4%) Strand=Plus/Plus Query 133303 GGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCAC 133362 |||||| || ||| ||| || || | ||||| |||||| || ||||| || || Sbjct 77800 GGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGAC 77859 Query 133363 ATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGA---AGCACAAACTATT 133419 ||||| ||| || || || |||||||| ||| | |||| ||||| || || Sbjct 77860 TTATTCCCTTCTCATCGACACATACATCAAGGATCCTCGCCAGCGCGAGCAC---CTCTT 77916 Query 133420 CAACGCCATTAGCGAAT---TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATG 133476 | ||||||| ||| |||| ||||| || ||||| | ||||||||| || | || Sbjct 77917 CGACGCCAT---CGATACCATTCCCTGTATCAAGAAGAAGGCGGACTGGGCTCTTCACTG 77973 Query 133477 GATCCAGGACAAGC-GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGG 133535 |||| |||||| || | |||| ||| ||||||||||| || |||| || |||| Sbjct 77974 GATCTCCGACAAGGAGTCTGCGTTT-GCTGAGCGTCTCGTTGCCTTCGCTGCCGTCGAGG 78032 Query 133536 GCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTAC 133595 | || || ||| ||| | ||| |||||| || ||| | || |||||||| | | | Sbjct 78033 GTATCTTCTTCTCTGGCTCCTTCGCCTCTATCTTCTGGTTGAAGAAGCGTGGCTTGATGC 78092 Query 133596 CTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTG 133655 | || ||| || || ||||| || || || | || |||| | |||||||| || | Sbjct 78093 CCGGCCTGACCTTCTCCAACGAGCTCATATCTCGTGATGAGGGCATGCACACCGACTTCG 78152 Query 133656 CC 133657 || Sbjct 78153 CC 78154 >seq2326 Length=152795 Score = 98.7 bits (108), Expect = 3e-15 Identities = 171/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 || |||| | ||||| || || || || || || || || | || || || || Sbjct 88844 TCCTCCAGAGCCTTGACCAACCGCCGTTGGATGTAGCCCGTCTCGGCCGTCTTGACGGCA 88785 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| ||||| |||||||| |||| || |||||||| | ||||| || || Sbjct 88784 GTATCAATGAGACCCTCACGACCAGCCATCGCGTGGAAGAAGAACTCTTGAGGAGTGAGA 88725 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CGAATCGTCGAACTTGG 302749 || | | | ||| |||| ||||| |||||||||||||| ||| |||| ||| | Sbjct 88724 CCTCGGAGGTACGAGTTCTCGACGAAGCCACGCGCCTCGGGACTGAA--GTCGTCCTTCG 88667 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | || || |||||||| | | | ||| | |||||||||||||| |||||| | Sbjct 88666 TGAAATGGGGCAGGGTGCGATGACGGAAACCGAACGGGATACGCTTTCCTTCAACGGATT 88607 Query 302810 GCTGTCC 302816 |||| || Sbjct 88606 GCTGCCC 88600 >seq125 Length=315652 Score = 86.0 bits (94), Expect = 2e-11 Identities = 112/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||| |||| |||||||| ||||| || ||||| ||||||||||||||||| | | Sbjct 28998 TGGCCGATGGTCATACGGGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATG 28939 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTT 251955 || || || ||||| ||||| ||| |||| | || || | || || || ||||| Sbjct 28938 CCCTCTGCGGTGAACGGCATGTCC---TCCTGGCGGTAGGTGATACCGATGGTACCCTTC 28882 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||||||| |||||| || || || Sbjct 28881 TGACCGTGACGAGAAGCGAACTTGTCGCCGAT 28850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471717258375177