Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3662 145 9e-29 seq125 114 2e-19 seq2326 104 3e-16 seq1592 102 1e-15 seq5080 96.9 4e-14 seq4755 93.3 5e-13 seq2313 93.3 5e-13 seq3992 87.8 2e-11 >seq3662 Length=107388 Score = 145 bits (160), Expect = 9e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 868697 GCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCC 868756 ||||||||| ||| ||| |||||| ||||| |||||||| ||||||||||| ||| Sbjct 75239 GCGTACTCGGACACCCGCTTCTCGAAGAAGTTCGTCTTGCCGGTGAGCGAGATCATGTCC 75298 Query 868757 ATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGG 868816 || | ||| || || | ||||||||||||||| || ||||| |||| | Sbjct 75299 ATGAAGTCGAAGGGATTCGTGACGTTGTAGTGCTTTTCGTTCCCCAGCGAGACGAGTAAC 75358 Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCC 868876 ||||| ||||| ||||||||||| |||||||| || | |||||||||||||||||||| Sbjct 75359 CGGTCTGCGACGAACTCGATGTATTGGCACATCAGTCTGGCGTTCATGCCGATGAGCGAG 75418 Query 868877 ACCGG 868881 ||||| Sbjct 75419 ACCGG 75423 Score = 138 bits (152), Expect = 1e-26 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| | ||| ||| ||||||| ||| || ||||| |||||||||| |||||||||| Sbjct 78501 GCCTTCGAGTAGTCGGACACGCGCTTCTCAAAGAAGTTCGTCTTGCCCTGGAGCGAGATC 78442 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||| | ||||||||||| |||| ||||| | | || Sbjct 78441 ATGTCCATGAAGTCGAAGGGGTTCGTGACGTTGTAGTGCTTCTCGCCGCCGAGGGCCACG 78382 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || || || || |||||||||||||| |||| |||||| ||||||||| || ||| Sbjct 78381 AGGAGACGATCCGCCACAAACTCGATGTATTGGCGCATGAGCTTGGCGTTCATACCAATG 78322 Query 868871 AGCGCCACCGGCAG 868884 ||| | || || || Sbjct 78321 AGCCCAACAGGGAG 78308 Score = 136 bits (150), Expect = 5e-26 Identities = 182/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| ||| | ||| Sbjct 77853 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGCCGCCTGG 77794 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| ||| |||||| || | ||||||||| ||||| || ||| || || || Sbjct 77793 ACCTCATTCGAGAACCGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCAAAG 77734 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || |||||| ||| ||||| || ||||||||| | | ||| ||||| | Sbjct 77733 AACGCGAGAACGTGCGAGATGAAGTGACGTTCGTCGTCGTTCAGGCGGTTGTTCCAGTCG 77674 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||| | ||||||| |||||| || ||||||| || ||||| ||||| ||| Sbjct 77673 TGGAGGTCCTTGGACAGGTCCATCTCCTCAGCCGTCCAGAAGGACGCCTCAGCCTTCTTG 77614 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 77613 TACATCTGCCA 77603 Score = 131 bits (144), Expect = 2e-24 Identities = 201/286 (70%), Gaps = 3/286 (1%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| ||| ||| ||||| |||||||||||| | ||| ||||| Sbjct 75635 ACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAGGCCGGGCATCAAGCCACGCTT 75694 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| || |||||| ||| || || || ||||||||||| || ||||| || Sbjct 75695 CTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAGAAGATGCCCTCCACAGCGGCGAA 75754 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | || ||||| || || || || || | |||||| | ||||| Sbjct 75755 CGCTACAAGACGCTCTGCGAA---CACGGAGCGTTCGTCCGCGATCCAGCGGAGGGCCCA 75811 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||| ||||| ||| | | ||||||| |||||||||||| |||||| | || Sbjct 75812 GTCCGCCTTCTTCTTGATGCACGGCACGGTGTCGATGGCGTCGAAGAGGAACGCGCGCTC 75871 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | ||||| |||| || |||||||| ||||| || || |||||| Sbjct 75872 AGTGGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTACGTCTCC 75917 Score = 123 bits (136), Expect = 3e-22 Identities = 188/266 (71%), Gaps = 9/266 (3%) Strand=Plus/Minus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260 |||||| |||| ||||||||||| | ||| |||||||| | ||| ||||| | | | Sbjct 78114 TCGTTGGAGAAGGTCAGGCCGGGCATCAAGCCACGCTTCTTCAACCAGAAGATAGAGGCG 78055 Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320 || ||| ||||| ||||| ||||||||||| || ||| | | ||| ||||| ||||| Sbjct 78054 AAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTCAGCAAAC 77995 Query 869321 GTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACC 869377 | || |||||||| |||||| | | |||||||| ||||| ||| | | Sbjct 77994 G----CAG--ACTCCTTGTCGGAGATCCAGTGAAGAGCCCAGTCCGCCTTCTTCTTGATA 77941 Query 869378 GACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAG 869437 | || | || ||||||||| |||||||| || | | || ||||||| || Sbjct 77940 CAGGGAATGGTATCGATGGCGTCGAAGAGGTGCTCGCGCTGGCGAGGATCCTTGATGTAT 77881 Query 869438 GTGTCGATCAGGAGCGAATAGGTCTC 869463 |||||||| || || ||||| ||||| Sbjct 77880 GTGTCGATGAGAAGGGAATAAGTCTC 77855 Score = 118 bits (130), Expect = 1e-20 Identities = 183/257 (71%), Gaps = 7/257 (3%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||| || | ||||||||| ||||||||||||||| ||| | ||||||| ||| Sbjct 75916 CCGAATGCACGTTCTCGATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCTGCGGCTT 75975 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| || |||||| | | ||||||||| |||||||||||| |||||||| Sbjct 75976 GGACCTCGTTAGAGAACCGCTCAACGAGGTTCTCGTTCACGATGCCGTCTGAGGCGGCGA 76035 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA----GCGACACCCAG 869806 | || || || |||| ||| ||||| || |||| | | | | ||| ||||| Sbjct 76036 AGAAGGCTAGCACGTAGGAGATGAAGTGCCGTTCGTTGGCATTTAACTTGCG-GTCCCAG 76094 Query 869807 TGGACGGTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTT 869865 | | | |||| ||| |||||| | ||| || | ||||||| || || | || || Sbjct 76095 TCCATGAGGTCGTGCG-AGAGGTCTATCTCTTCTACCGTCCAGAAGGACGCTTGAGCATT 76153 Query 869866 TTTGTACATCTCCCATA 869882 ||||||||||| ||||| Sbjct 76154 TTTGTACATCTGCCATA 76170 >seq125 Length=315652 Score = 114 bits (126), Expect = 2e-19 Identities = 321/487 (66%), Gaps = 17/487 (3%) Strand=Plus/Plus Query 733052 CGTCAAGATC-GTGACGCGCGCCATGCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGC 733110 |||||||||| ||| | ||| | | ||| ||| || | |||||||| | | || | Sbjct 28813 CGTCAAGATCCGTGTC-CGCTCGACGCGTATACCCCAGATCGGCGACAAGTTCGCTTCTC 28871 Query 733111 GCCACGGCCAAAAGGGCACCGTGGGCAGCGTGCGCTCCACC--GAGGACATGCCCTGGTC 733168 | ||||| || ||||| ||| | || | | | || || ||||||||||| | || Sbjct 28872 GTCACGGTCAGAAGGGTACCATCGGTATCA--CCTACCGCCAGGAGGACATGCCGT--TC 28927 Query 733169 GCCGCGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCAT 733228 |||| | ||| ||||||||||||| | |||||||| |||||||| ||||| || || Sbjct 28928 ACCGCAGAG-GGCATCACGCCCGACATCATCATCAACCCCCACGCCATTCCGTCCCGTAT 28986 Query 733229 GACCATGGGCAAGATGCTCGAGGCCCTCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACAT 733288 |||||| ||| | || ||||| || ||| |||||| || | | || || Sbjct 28987 GACCATCGGCCACTTGGTCGAGTGTCTGCTGTCCAAGGTCGCGACGCTCATCGGAAACGA 29046 Query 733289 CGGCGACGGCACGCCCTTTGGCGGCGTCACCNNNNNNNNNNNNNNNNNNGAGTTGGCCCG 733348 ||||||| |||||||| || | ||||| | || ||| Sbjct 29047 GGGCGACGCGACGCCCTTCACCGACCTCACC---GTCGAGTCCGTCTCTGCCTTCCTCCG 29103 Query 733349 CCA---CGGGTGCGAGCGCTACGGCAAGGAGGTGCTCTACCACCCGCACACCGGCGAGCC 733405 ||| |||| | || |||| ||||| | |||||| ||||||||| | Sbjct 29104 CCAGCGAGGGTACCAGTCTCGCGGCCTCGAGGTCATGTACCACGGCCACACCGGCCGGAA 29163 Query 733406 CATGGCGGCGTTGATCT-TCTCGGCGCCGGTCTACTACCAGGCCCTCCGGCACGTGGCCA 733464 || |||| | ||| |||||| || ||||||||| |||| |||| ||| | Sbjct 29164 GTTGCAGGCGCAGGTCTACCTCGGC-CCCACGTACTACCAGCGCCTCAAGCACATGGTCG 29222 Query 733465 TCGACAAGATCCACGCGCGCCCGCGCGGTCCCGTGCAGATGCTCACCAAGCAGCCGGTCG 733524 ||||||||||||| | ||| | || || || |||||||| |||||| ||||| |||| Sbjct 29223 ACGACAAGATCCACTCTCGCGCTCGTGGGCCGGTGCAGATCCTCACCCGCCAGCCCGTCG 29282 Query 733525 AGGGCCG 733531 |||| || Sbjct 29283 AGGGTCG 29289 >seq2326 Length=152795 Score = 104 bits (114), Expect = 3e-16 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112 ||||||||||||||||| |||||| || || ||| | || ||||||||||| | Sbjct 17338 ATCGGCGGCACGGTGACCTGCGTGATCCGGGGCGCGCCCTCGGGGCTCGGCGAGCCCGTC 17279 Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172 || |||||| ||||||| |||||| ||||| ||||| || ||||| || ||||| | Sbjct 17278 TTCGACAAGCTCGAGGCGAAGCTCGCGCACGCGATGCTCTCCATCCCCGCGACCAAAGCC 17219 Query 19173 TTCGAGATTGGCAGCGGGTT 19192 |||||||| ||| ||| || Sbjct 17218 TTCGAGATCGGCTCCGGCTT 17199 Score = 100 bits (110), Expect = 3e-15 Identities = 107/139 (77%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 19585 CTTTAAGCCGCCGGCCACGATCGGCTCCGCGCAGCAGACGTGCGAA-TACGGCGGCGAGC 19643 ||| ||| |||| || |||||| | |||||| ||| ||| | |||| ||| || Sbjct 17057 CTTCAAGTCGCCCGCGACGATCTCCCAGGCGCAGAGCACG-GCGCAGTACGACGGTACGC 16999 Query 19644 AGGCCACGTTGGAGGCGCGCGGGAGGCACGACCCGTGCGTCGTCGCGCGCGCGGTCCCCA 19703 | |||| | | || |||||||||||||||||||| ||||| | |||||||| |||| Sbjct 16998 CTGGCACGCTCGCTGCCCGCGGGAGGCACGACCCGTGTGTCGTTCCCCGCGCGGTGCCCA 16939 Query 19704 TCGTCGAGGCCATGGCGGC 19722 ||||||||||||||||||| Sbjct 16938 TCGTCGAGGCCATGGCGGC 16920 >seq1592 Length=115252 Score = 102 bits (112), Expect = 1e-15 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| ||||||| |||| ||||||||||| || ||||||| || | ||| | | Sbjct 6482 GCCTCGGTCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCAAGATGGCCATTGCC 6423 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||||| ||| ||||||||| ||||||||||| || Sbjct 6422 TTGTTGGAGATACCCGTGTCGGGGTGGACCTGCTTGAGGAC 6382 >seq5080 Length=124042 Score = 96.9 bits (106), Expect = 4e-14 Identities = 166/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 399689 GCAGAGCCGGAGGGACGACCTCGAGGCCCTGGCCTACACGCTGGTCCAGTTGGCCAAGGG 399748 |||| |||| |||||||||||||||| || || ||| ||| || | || | || Sbjct 27952 GCAGGTCCGGCGGGACGACCTCGAGGCGCTCGCGTACGTGCTCATCTACTTCCTCCGCGG 27893 Query 399749 CTCGCTGCCGTGGGACAGCGTGCCGGGCCACAACAAGGCCAAGCGCTGCGCGCGCATCCG 399808 | |||| |||||| | ||| ||| | | || || | | ||||| ||||||||||||| Sbjct 27892 CGCGCTCCCGTGGCAGAGCCTGCGCGCGCGCACCACGCGCGAGCGCCGCGCGCGCATCCG 27833 Query 399809 CGACTGCAAGGCCAAGAC---GGGCGTCGACGTCATCTGCGCCGGCCT-CCCGCCGTGCT 399864 ||| |||| | ||| | || ||| | ||||||| ||||| ||||||| | | Sbjct 27832 CGA---CAAGAAGATGACCGTGCCCGCCGAGGCGCTCTGCGCGGGCCTCCCCGCCGAG-T 27777 Query 399865 TTGCGCGCTTCCTGGCCTATGCGCGCGCGCTCTCCTTTCCCGAGACCCCCGACTATG 399921 | ||| |||||| ||| ||||||||||| ||| ||| | |||||||||| Sbjct 27776 TCGCGATCTTCCTCAACTACGCGCGCGCGCTGCGCTTCGACGACGCGCCCGACTATG 27720 >seq4755 Length=85889 Score = 93.3 bits (102), Expect = 5e-13 Identities = 185/276 (67%), Gaps = 15/276 (5%) Strand=Plus/Plus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 || |||||||| |||| ||| ||| | || || | || ||||| |||||| ||| Sbjct 31797 CCAATGCCGCCAGCCGTCTTACTGATCATGGCACAGTCCTTCAGCGTCGAGTAGATACCC 31856 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 ||||| ||||| ||||||| |||||| ||||| || | || |||| | ||| Sbjct 31857 TCGATGGAGTCATCCTTCATCGACACGAGGAAGCAAGAGCTGAGCTGGGGGTTGGGAGTG 31916 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAG 1630362 ||||||||||| || || || | ||| |||||| | || |||||| || |||| Sbjct 31917 CCGGCGTTGAACAGTGTAGGTGACGCATGGGTGAAGTAACGCTCGGACATGAGGTTGTAG 31976 Query 1630363 GTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCG 1630422 || ||| | ||||| || | ||||| | || | | ||||| ||| Sbjct 31977 GTCTCGATCGCGCGC------------TCGATGTCGG---ATCCGTGGATGCCGACAGCG 32021 Query 1630423 ACGCGCATGAGCATGTACTGGGGCCGCTCGACGACG 1630458 || |||||||||| || || || |||||| | ||| Sbjct 32022 ACACGCATGAGCAAGTGTTGAGGACGCTCGGCAACG 32057 >seq2313 Length=33858 Score = 93.3 bits (102), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| | ||||| |||| |||||||| || || ||||||| || | ||| | | Sbjct 11874 GCCTCGGTCGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCAGGATGGCCATGGCC 11815 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||||| || ||| |||||||||||||||||||| Sbjct 11814 TTGTTGGAGATACCAGTGTCAGGGTGCACCTGCTTGAGCAC 11774 >seq3992 Length=40521 Score = 87.8 bits (96), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| |||| || |||| || ||||| ||||||||||| | | | ||||| | Sbjct 38244 GCCTCGGTCGCGATACGCTCGAAGATATCGTTCACAAACGAGTTGAGAATGGCCATCGCC 38185 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||| ||||| ||| ||| ||||| |||||||||||||| Sbjct 38184 TTGTTCGAGATACCCGTGTCAGGGTGTACCTGCTTGAGCAC 38144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106702533821757