Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4755 120 3e-22 seq4520 120 3e-22 seq633 120 3e-22 seq145 82.4 7e-11 >seq4755 Length=85889 Score = 120 bits (132), Expect = 3e-22 Identities = 306/461 (66%), Gaps = 6/461 (1%) Strand=Plus/Plus Query 138551 TGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCA 138610 ||||| ||||||| || | |||||||| |||| ||||| || | || || |||| Sbjct 30529 TGGTGTAAGGCTCGAAGCACTCGTTGTTACCCAAGATCTGGCTGGTAGAGGCAGTTGGCA 30588 Query 138611 TGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGA--TTCGTTCCTTGAGCGA 138668 | ||| | | ||| || ||||| | ||||| | | |||| |||| || Sbjct 30589 TCGGCGCGAGTAGAAGCGAGTTCCGAAGCCCGTGCTGTGCAACCTTCG--CCTTCAGGCT 30646 Query 138669 CGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAA 138728 || ||||||||| | ||| |||| | ||| | |||||||| | | | ||| Sbjct 30647 CGTCCAGTCCCAAAGATCCGTAGGCGTCACCCCCCAGAGGTCGTACTGGAGCTTGCCCTC 30706 Query 138729 ACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCT 138788 || || ||||||| ||||| || || || |||| ||||||| ||| ||| Sbjct 30707 GGAAGCAGGGCTGCCTTGGTACGTCTCATAGGTGCCGAACTGCTGCGCCATCTCACAGCT 30766 Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC 138848 ||||||| || | | ||| || || || |||||| | || ||| || ||||| Sbjct 30767 GGCCTCGACGGCGGCGTGGTAGATGGTCTCAAAGATCTGCAGGTTCAGCTTGCGCGCCTC 30826 Query 138849 GGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCAC 138908 | | ||| | ||||||||||| | |||| ||||||||||| || ||||| || | Sbjct 30827 AGGGGAGTCGAAGGGCATGCGGAGGGCCATGAAGGCGTCGGCCAGACCCTGCACACCGAT 30886 Query 138909 TCCGACAGGGCGATGGCGCAGATTTG-ACGCTTTTGCGGCTTCGATAGGATAATAGTTTA 138967 |||| || || ||||||| |||| |||| | || | ||| ||||| ||||| | Sbjct 30887 ACCGATGGGACGGTGGCGCATGTTTGAACGC-CTCGCCTCGGGGATCGGATAGTAGTTGA 30945 Query 138968 CATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTC 139008 | |||||||| ||| | || | |||||||||| ||| Sbjct 30946 CGTCGATGATGCGGTTCAGGTTGAACGCGACCACCTTCGTC 30986 >seq4520 Length=427429 Score = 120 bits (132), Expect = 3e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || |||||||| || || | | Sbjct 157481 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCTTCA 157540 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || |||||||| || Sbjct 157541 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 157600 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||||| |||||| | | | | || || || ||| Sbjct 157601 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 157660 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || |||||||| ||||| || || |||| Sbjct 157661 ATCCAAAAGGAGTCGACTCTTCATCTTG 157688 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||| | || || || || || || ||||| || || | || Sbjct 157991 ATGCAGATTTTCGTCAAGACGTTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 158050 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||| || || || || ||||| ||| Sbjct 158051 GACACGATCGACAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATCCCGCCCGACCAA 158110 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||| |||||||| | | | || ||||| ||| Sbjct 158111 CAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTTTCGGATTACAAC 158170 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || ||| | || | || ||||||| ||| Sbjct 158171 ATCCAAAAGGAGTCGACTCTTCACCTCGTCCTCCGCCTGCGCGGTGGC 158218 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||| | ||||| || || || || || || || || | || Sbjct 157709 ATGCAAATCTTCGTGAAGACGTTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCC 157768 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| || ||||| || || || || || || || Sbjct 157769 GATACCATCGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGGATTCCCCCGGACCAG 157828 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| ||||| | | |||| ||||| ||| Sbjct 157829 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACGTTGTCCGATTACAAC 157888 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 157889 ATTCAGAAGGAGTCTACCCTTCAC 157912 >seq633 Length=42484 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || |||||||| || || || | Sbjct 35368 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCG 35309 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| ||||| || |||||||| || Sbjct 35308 GATACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 35249 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| |||||||| ||||| ||||| | | | | | || ||||| ||| Sbjct 35248 CAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACAAC 35189 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 35188 ATTCAGAAGGAGTCTACCCTGCAC 35165 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || || || || ||||| || || | || Sbjct 35088 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 35029 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 35028 GACACTATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAG 34969 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || ||| |||||||| | | | | || ||||| ||| Sbjct 34968 CAGCGCCTGATCTTTGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTCTCCGATTACAAC 34909 Query 24884 ATTCAAAAGGA 24894 || || ||||| Sbjct 34908 ATCCAGAAGGA 34898 >seq145 Length=336 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || ||||| || || | | Sbjct 280 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACGATCACTCTCGAGGTCGAGTCGTCG 221 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 220 GACACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCAG 161 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || ||||| ||||| | | | | || ||||| ||| Sbjct 160 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTCTCGGATTACAAC 101 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | || | || | ||||| ||| Sbjct 100 ATCCAGAAGGAGTCGACGCTGCACCTTGTCCTCCGTCTCCGCGGCGGC 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449867676185880