Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2306 165 7e-36 >seq2306 Length=115265 Score = 165 bits (182), Expect = 7e-36 Identities = 263/373 (71%), Gaps = 7/373 (2%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA-- 34260 ||||||||| ||||| ||||| || |||||||||| | | | ||| | | ||| Sbjct 108068 CGGCGGGTTCTTCAGGATGAACGTCGTGAGCTTATG-GCGCA-TGTCGACGCCGGTGCGC 108011 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 | ||||| || |||||| | || ||| |||| | | || | ||| || || Sbjct 108010 TCGCCGCACGCCTTGCAGTC---ACGGATGATGTCGTCGGTCTTGGTGATGATCAGGTCC 107954 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||||||||| | || || || | ||| ||||| ||| || || || || || Sbjct 107953 GTCTCCGGGTTCTTGCACGCCTTGCAGAGCACGAACTTCTCGATAAAGCCGTCGAGGAGC 107894 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 || | | ||| | |||||| | ||||||||| ||| | || ||||| || | ||| Sbjct 107893 TCGCGCAGCTTCGTCGCGTCGTGCGCGCCGTTGACAATGTACCGGTCGTTCTTCTCGTCG 107834 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | ||| |||||||| ||||||||||||||| |||| || || || ||| ||| || Sbjct 107833 AACGACGTCTGCGCGCCAAGCTCGCACCCGAAGAACTTGGTGGGATACGTGGGCGGGCGG 107774 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | ||||| ||| | |||| |||||| |||||||||||||||||||||||||| Sbjct 107773 CTGAGCGCGCGGGCCACGTCGGACATGTTCGGAATGACAGTCTTGATGCCGTTGCCCTTG 107714 Query 34561 CCTTCGACCTTGG 34573 ||||||| ||||| Sbjct 107713 CCTTCGATCTTGG 107701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412814827351253