Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3662 168 1e-35 seq125 111 2e-18 seq4755 102 1e-15 seq1592 102 1e-15 seq2313 93.3 7e-13 seq3992 87.8 3e-11 seq2326 86.0 1e-10 >seq3662 Length=107388 Score = 168 bits (186), Expect = 1e-35 Identities = 213/291 (73%), Gaps = 5/291 (2%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 ||||||||||| | ||| |||||||| | ||| ||||| | ||| ||| ||||| Sbjct 78099 AGGCCGGGCATCAAGCCACGCTTCTTCAACCAGAAGATAGAGGCGAAGGAGCCAGAGAAG 78040 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGC-CCTC 794495 ||||| ||||||||||| || ||| | ||||| ||||| ||||| | ||| | ||| Sbjct 78039 AAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTCAGCAAACG----CAGACTCCTT 77984 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 | | |||||| | | ||||| || ||||| ||| | | |||| | || ||||| Sbjct 77983 GTCGGAGATCCAGTGAAGAGCCCAGTCCGCCTTCTTCTTGATACAGGGAATGGTATCGAT 77924 Query 794556 GGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 |||| |||||||| || || | || ||||||| ||| ||||||||||| || || Sbjct 77923 GGCGTCGAAGAGGTGCTCGCGCTGGCGAGGATCCTTGATGTATGTGTCGATGAGAAGGGA 77864 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || ||||| ||||||||||| || || |||||||||||| || ||||| Sbjct 77863 ATAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 77813 Score = 158 bits (174), Expect = 2e-32 Identities = 232/328 (71%), Gaps = 3/328 (1%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| ||| ||| |||| |||||||||||| | ||| ||||| Sbjct 75635 ACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAGGCCGGGCATCAAGCCACGCTT 75694 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| || ||||| ||| || || || ||||||||||| || ||||| || Sbjct 75695 CTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAGAAGATGCCCTCCACAGCGGCGAA 75754 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | || || ||||| || || | || || | |||||| | ||||| Sbjct 75755 CGCTACAAGACGCTCTGCGAACACGGA---GCGTTCGTCCGCGATCCAGCGGAGGGCCCA 75811 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 || ||||| ||| | | | ||||| |||||||||||| |||||| | ||| Sbjct 75812 GTCCGCCTTCTTCTTGATGCACGGCACGGTGTCGATGGCGTCGAAGAGGAACGCGCGCTC 75871 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 ||||| |||| ||| |||||||||||||| ||||| ||||| || || | ||| || Sbjct 75872 AGTGGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTACGTCTCCGAATGCACGTTCTC 75931 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| |||||||||||| || |||||| Sbjct 75932 GATCATGATCTGGAAGCCGTAGAAGCAG 75959 Score = 120 bits (132), Expect = 5e-21 Identities = 150/204 (74%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| | || ||| ||||||| ||| || ||||| |||||||||| || Sbjct 78509 TGACACCGGCCTTCGAGTAGTCGGACACGCGCTTCTCAAAGAAGTTCGTCTTGCCCTGGA 78450 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCC 794008 ||||||||| ||||| | ||| ||||| | ||| |||||||||||||| || Sbjct 78449 GCGAGATCATGTCCATGAAGTCGAAGGGGTTCGTGACGTT--GTAGTGCTTCTCGCCGCC 78392 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 ||| | | | || || || || || || || || ||||| |||| |||||| |||||| Sbjct 78391 GAGGGCCACGAGGAGACGATCCGCCACAAACTCGATGTATTGGCGCATGAGCTTGGCGTT 78332 Query 794069 CATGCCGATGAGCGCCACGGGCAG 794092 ||| || |||||| | || || || Sbjct 78331 CATACCAATGAGCCCAACAGGGAG 78308 Score = 116 bits (128), Expect = 6e-20 Identities = 135/180 (75%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 793905 GCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCC 793964 || |||||| ||| ||| |||||| ||||| |||||||| ||||||||||| ||| Sbjct 75239 GCGTACTCGGACACCCGCTTCTCGAAGAAGTTCGTCTTGCCGGTGAGCGAGATCATGTCC 75298 Query 793965 ATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCA 794022 || | ||| || || | ||| ||||||||| ||| ||| ||||| | || | Sbjct 75299 ATGAAGTCGAAGGGATTCGTGACGTT--GTAGTGCTTTTCGTTCCCCAGCGAGACGAGTA 75356 Query 794023 GGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCG 794082 ||||| |||||||| || ||||| |||||||| || |||||||||||||||||||| Sbjct 75357 ACCGGTCTGCGACGAACTCGATGTATTGGCACATCAGTCTGGCGTTCATGCCGATGAGCG 75416 Score = 89.7 bits (98), Expect = 8e-12 Identities = 155/221 (70%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||| | |||||||||| || ||| || | | |||||||| | Sbjct 75954 AAGCAGCGGGCCTCTGCGGCTTGGACCTCGTTAGAGAACCGCTCAACGAGGTTCTCGTTC 76013 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||||||||| ||||||||| ||||| || |||| ||| ||||| || |||| | Sbjct 76014 ACGATGCCGTCTGAGGCGGCGAAGAAGGCTAGCACGTAGGAGATGAAGTGCCGTTCGTTG 76073 Query 796261 TCGCTGA----GCGAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGG 796315 | | | ||| | |||||| | |||| ||| |||||| | ||| || | | Sbjct 76074 GCATTTAACTTGCG-GTCCCAGTCCATGAGGTCGTGCG-AGAGGTCTATCTCTTCTACCG 76131 Query 796316 TCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 |||| ||||| || | || ||||||||||||| ||||||| Sbjct 76132 TCCAGAAGGACGCTTGAGCATTTTTGTACATCTGCCATATC 76172 >seq125 Length=315652 Score = 111 bits (122), Expect = 2e-18 Identities = 324/495 (65%), Gaps = 21/495 (4%) Strand=Plus/Plus Query 653648 CCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG---CAGC 653704 ||| || | |||||||| | | || || ||||| || ||||| ||| | || || | Sbjct 28844 CCCCAGATCGGCGACAAGTTCGCTTCTCGTCACGGTCAGAAGGGTACCATCGGTATCACC 28903 Query 653705 GTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTC 653764 ||| | ||||| ||||||| || |||| | |||| ||||||||||||| || Sbjct 28904 TACCGCCAG---GAGGACATGCCGT--TCACCGCA-GAGGGCATCACGCCCGACATCATC 28957 Query 653765 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTG 653824 |||||||| |||||||| ||||| || |||||||| ||| | || | ||| || ||| Sbjct 28958 ATCAACCCCCACGCCATTCCGTCCCGTATGACCATCGGCCACTTGGTCGAGTGTCTGCTG 29017 Query 653825 GGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTTTGGCGGCGTCACC 653884 |||||| || | | || ||| |||||||| || || || || | ||||| Sbjct 29018 TCCAAGGTCGCGACGCTCATCGGAAACGAGGGCGACGCGACGCCCTTCACCGACCTCACC 29077 Query 653885 GTNNNNNNNNNNNNNNNNNAGTTGGCCCGCCA---CGGGTGCGAGCGCTACGGCAAGGAG 653941 || || |||||| |||| | || |||| ||| Sbjct 29078 GTCGAGTCCGTCTCTGCC---TTCCTCCGCCAGCGAGGGTACCAGTCTCGCGGCCTCGAG 29134 Query 653942 GTGCTCTACCACCCGCACACGGGCGAGCCCATGGAGGCGTTGATCT-TTTCGGCGCCGGT 654000 || | |||||| ||||| ||| | || ||||| | ||| ||||| || Sbjct 29135 GTCATGTACCACGGCCACACCGGCCGGAAGTTGCAGGCGCAGGTCTACCTCGGC-CCCAC 29193 Query 654001 CTACTACCAGGCCCTGCGCCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGCGGCCC 654060 ||||||||| ||| ||| ||| | ||||||||||||| | || | || || || Sbjct 29194 GTACTACCAGCGCCTCAAGCACATGGTCGACGACAAGATCCACTCTCGCGCTCGTGGGCC 29253 Query 654061 CGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCG--GTCGCGCTCGGGCGGCTTTCGC 654118 |||||||| |||||| ||||| |||||||| || |||| | || ||| | || Sbjct 29254 GGTGCAGATCCTCACCCGCCAGCCCGTCGAGGGTCGTAGTCGTG--ACGGTGGCCTGCGG 29311 Query 654119 CTCGGAGAGATGGAG 654133 |||||||||||||| Sbjct 29312 TTCGGAGAGATGGAG 29326 >seq4755 Length=85889 Score = 102 bits (112), Expect = 1e-15 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2070133 AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGC 2070192 || ||||||||||| |||||||| |||| || || || |||||||||| ||| || || Sbjct 30858 AAGGCGTCGGCCAGACCCTGCACACCGATACCGATGGGACGGTGGCGCATGTTTGAACGC 30917 Query 2070193 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 | |||||||| | ||| |||| ||||| |||||| | |||||| |||||| Sbjct 30918 CTCGCCTCGGGGATCGGATAGTAGTTGACGTCGATGATGCGGTTCAGGTTG 30968 Score = 87.8 bits (96), Expect = 3e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| || | || || |||||||| || || ||||||||| ||||||||||| | Sbjct 31494 TCCAAAGCGCATAGAATAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGAA 31553 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 |||| | | |||| || |||||||||||||||||| |||||| ||| || ||||| Sbjct 31554 GGTCAATGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCGCCGG 31613 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 31614 GACGCTTGTTGCCACC 31629 >seq1592 Length=115252 Score = 102 bits (112), Expect = 1e-15 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| ||||||| |||| ||||||||||| || ||||||| ||| | ||| | Sbjct 6482 GCCTCGGTCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCAAGATGGCCATTGCC 6423 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| ||| ||||||||| ||||||||||| || Sbjct 6422 TTGTTGGAGATACCCGTGTCGGGGTGGACCTGCTTGAGGAC 6382 >seq2313 Length=33858 Score = 93.3 bits (102), Expect = 7e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| | ||||| |||| |||||||| || || ||||||| ||| | ||| | Sbjct 11874 GCCTCGGTCGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCAGGATGGCCATGGCC 11815 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| || ||| |||||||||||||||||||| Sbjct 11814 TTGTTGGAGATACCAGTGTCAGGGTGCACCTGCTTGAGCAC 11774 >seq3992 Length=40521 Score = 87.8 bits (96), Expect = 3e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| |||| || |||| || ||||| ||||||||||| | || | ||||| Sbjct 38244 GCCTCGGTCGCGATACGCTCGAAGATATCGTTCACAAACGAGTTGAGAATGGCCATCGCC 38185 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| ||| ||| ||||| |||||||||||||| Sbjct 38184 TTGTTCGAGATACCCGTGTCAGGGTGTACCTGCTTGAGCAC 38144 Score = 86.0 bits (94), Expect = 1e-10 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 ||| ||||| | |||||| ||||| |||| ||||||| | || || || || | | ||| Sbjct 38428 CTTCGTGACTGACTTGGTGCCCTCGGAGATGGCGTGCTTCGCGAGCTCACCAGGGAGGAT 38369 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| ||||||||||||||||||||||| Sbjct 38368 CAGCCGCACGGCGGTCTGGATCTCGCG 38342 >seq2326 Length=152795 Score = 86.0 bits (94), Expect = 1e-10 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||| || ||||| || ||||||||| || || |||| | | ||| | Sbjct 88684 CCCGAGGCGCGTGGCTTCGTCGAGAACTCGTACCTCCGAGGTCTCACTCCTCAAGAGTTC 88743 Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141 || | ||| ||| | || || ||||||||| | || || |||||||||||||||||| Sbjct 88744 TTCTTCCACGCGATGGCTGGTCGTGAGGGTCTCATTGATACTGCCGTCAAGACGGCCGAG 88803 Query 431142 ACGGGCTACATCCAGCGTCGGT 431163 |||||||||||||| || |||| Sbjct 88804 ACGGGCTACATCCAACGGCGGT 88825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915680380960919