Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq633 141 6e-29 seq4520 114 8e-21 seq145 107 1e-18 >seq633 Length=42484 Score = 141 bits (156), Expect = 6e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||||||||||||||| ||||| |||||||| || |||| | || Sbjct 34541 AGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCC 34600 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 34601 TCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 34660 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || || ||| || || | || || ||| Sbjct 34661 TGGATCTTCGCCTTCACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTC 34720 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||| ||||| || |||||||||||| Sbjct 34721 TTGCCCGTGAGCGTCTTGACGAAGATCTGCATG 34753 Score = 131 bits (144), Expect = 1e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | ||| ||||||||||||||| || ||||| ||| ||||| | || || || Sbjct 35163 AGGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGC 35222 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||||||||| || || |||||||| | || | || |||||||| | || Sbjct 35223 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATC 35282 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || || |||||| || | || |||||||| || Sbjct 35283 TTGGCCTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCG 35342 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||||||| || |||||||||||| Sbjct 35343 GTGAGGGTCTTCACGAAGATCTGCATG 35369 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || || | ||||||||||||||| ||||| || || || ||| |||| |||| |||| Sbjct 34883 AGATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCAAC 34942 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || |||||||| || |||||||| | || | ||||||||||| | || Sbjct 34943 TGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATC 35002 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || | |||||| || | || |||||||| || Sbjct 35003 TTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCG 35062 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| |||||||||||||| Sbjct 35063 GTCAAGGTCTTGACAAAGATCTGCAT 35088 >seq4520 Length=427429 Score = 114 bits (126), Expect = 8e-21 Identities = 157/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || |||| || |||||| || ||||| ||||| || ||| | || |||| Sbjct 157693 CAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGGCCATC 157634 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| ||||| || ||||||||||| | || | ||||||||||| Sbjct 157633 CTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTC 157574 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || || || || | ||||| || | |||||| || | || | Sbjct 157573 CTGGATCTTCGCCTTCAC--AT--TGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGA 157518 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| |||||||||||||| |||||||||||||| Sbjct 157517 TCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || |||||| || ||||| || ||||| || |||| |||| Sbjct 158202 AGGACGAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCC 158143 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| ||||||||||| || || || ||||| |||| | ||||||||||| Sbjct 158142 TCCAACTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCT 158083 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | |||| || | ||| || || | ||| |||||| Sbjct 158082 TGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 158023 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | ||||| || || ||||||||| Sbjct 158022 TTGCCAGTCAACGTCTTGACGAAAATCTGCATG 157990 Score = 102 bits (112), Expect = 5e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||||||||| || || || | | || | || || || Sbjct 157914 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGC 157855 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||| ||||||| || |||||||| | || | |||||||||||| | || Sbjct 157854 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATC 157795 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 ||| |||||| | || | || | |||||| |||| ||| || ||||| || Sbjct 157794 TTTGCCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCG 157735 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || ||||| ||||| Sbjct 157734 GTCAACGTCTTCACGAAGATTTGCAT 157709 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || || |||| | || Sbjct 157464 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCC 157405 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| || ||||||||||| ||||||||||| Sbjct 157404 TCGAGCTGCTTGCCCGCGAAGATCAGGCGTTGCTGGTC 157367 >seq145 Length=336 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| || ||||| ||| | || | || Sbjct 69 AGGACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCGTCC 128 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || |||||||| |||| | ||||||||||| Sbjct 129 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCC 188 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || | |||||| || | || || ||| Sbjct 189 TGGATCTTCGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTC 248 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | |||||| || ||||||||||| Sbjct 249 TTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325671678923699